RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 BZW2Q9Y6E2 419 aaKnown RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 DOCK5Q9H7D0 1870 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 TMEM110-MUSTN1A8MSY1 372 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 QARSP47897 775 aaKnown RBP15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 TRAF1Q13077 416 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 PRPF4BQ13523 1007 aaKnown RBP15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 XKR9Q5GH70 373 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 LRRC31Q6UY01 552 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 SEL1LQ9UBV2 794 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 AMACRQ9UHK6 382 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 GTPBP10A4D1E9 387 aaKnown RBP15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 CCDC169A6NNP5 214 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 PLA2G6O60733 806 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 MAP2K1Q02750 393 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 PRKG1Q13976 671 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 BAATQ14032 418 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 DCAF12L1Q5VU92 463 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 NT5DC3Q86UY8 548 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 BSNDQ8WZ55 320 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 PSD3Q9NYI0 1048 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 HSPBP1Q9NZL4 362 aa15.29■□□□□ 0.04
PCDHGA3-202ENST00000612467 GOLGA6CA6NDK9 693 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 GOLGA6DP0CG33 693 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 FLT3P36888 993 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 VAMP7P51809 220 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 VPS36Q86VN1 386 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 OR2W6PQ8NHA6 318 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 SYT11Q9BT88 431 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 TRIM31Q9BZY9 425 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 GOLGA6AQ9NYA3 693 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 TMOD4Q9NZQ9 345 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 LARSQ9P2J5 1176 aaKnown RBP15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 WDR46O15213 610 aaKnown RBP15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 FKBP1CQ5VVH2 108 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 PCNX4Q63HM2 1172 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 RNF207Q6ZRF8 634 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 IFT20Q8IY31 132 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 PDCD2LQ9BRP1 358 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 MKNK1Q9BUB5 465 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 HACL1Q9UJ83 578 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 STXBP5LQ9Y2K9 1186 aa15.28■□□□□ 0.04
PCDHGA3-202ENST00000612467 NFKBIEO00221 500 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 PLS3P13797 630 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 ADSSP30520 456 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 MARCKSL1P49006 195 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 ARHGEF16Q5VV41 709 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 ANO5Q75V66 913 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 MTMR14Q8NCE2 650 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 PIK3R5Q8WYR1 880 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 SEMA4DQ92854 862 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 TMEM59LQ9UK28 342 aa15.27■□□□□ 0.04
PCDHGA3-202ENST00000612467 KRIT1O00522 736 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 SART1O43290 800 aaKnown RBP15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 SGPL1O95470 568 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 ATP1A2P50993 1020 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 MAP3K10Q02779 954 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 STXBP4Q6ZWJ1 553 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 JDP2Q8WYK2 163 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 BTBD6Q96KE9 485 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 DEFB129Q9H1M3 183 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 PXMP2Q9NR77 195 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 CALCOCO1Q9P1Z2 691 aa15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.03
PCDHGA3-202ENST00000612467 BTNL10A8MVZ5 291 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 TTI1O43156 1089 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 KRT13P13646 458 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 ECHS1P30084 290 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 GMPSP49915 693 aaPredicted RBP15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 HMGCS2P54868 508 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 C10orf76Q5T2E6 689 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 LEKR1Q6ZMV7 388 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 SCFD2Q8WU76 684 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 DHX38Q92620 1227 aaKnown RBP15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 PCDHB18PQ96TA0 734 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 KIAA1683Q9H0B3 1180 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 TMEM117Q9H0C3 514 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 TAOK3Q9H2K8 898 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 DPH5Q9H2P9 285 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 LRRC4CQ9HCJ2 640 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 ZNF233A6NK53 670 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 ZNF862O60290 1169 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 FGGP02679 453 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 BCRP11274 1271 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 TNIP1Q15025 636 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 NFIL3Q16649 462 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 LMBRD2Q68DH5 695 aaPredicted RBP15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 EMBQ6PCB8 327 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 GOLGA6L1Q8N7Z2 621 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 TRIM51Q9BSJ1 452 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 ERVK-5Q9HDB9 667 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 RNF146Q9NTX7 359 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 TCEAL9Q9UHQ7 104 aa15.26■□□□□ 0.03
PCDHGA3-202ENST00000612467 ADGRA3Q8IWK6 1321 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 VWA5AO00534 786 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms