RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 NOC3LQ8WTT2 800 aaKnown RBP19.27■□□□□ 0.68
SREK1-216ENST00000612404 HVCN1Q96D96 273 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 DEFB118Q96PH6 123 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 THAP9Q9H5L6 903 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 EXOC7Q9UPT5 735 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 TRAF3IP3Q9Y228 551 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 MBLAC1A4D2B0 266 aaPredicted RBP19.27■□□□□ 0.67
SREK1-216ENST00000612404 CLIC2O15247 247 aa19.27■□□□□ 0.67
SREK1-216ENST00000612404 ABCD1P33897 745 aa19.27■□□□□ 0.67
SREK1-216ENST00000612404 FKBP3Q00688 224 aaKnown RBP19.27■□□□□ 0.67
SREK1-216ENST00000612404 STRN3Q13033 797 aa19.27■□□□□ 0.67
SREK1-216ENST00000612404 CDKAL1Q5VV42 579 aa19.27■□□□□ 0.67
SREK1-216ENST00000612404 KIAA0319LQ8IZA0 1049 aa19.27■□□□□ 0.67
SREK1-216ENST00000612404 TRIM5Q9C035 493 aa19.27■□□□□ 0.67
SREK1-216ENST00000612404 FRMPD3Q5JV73 1810 aa19.27■□□□□ 0.67
SREK1-216ENST00000612404 TRIP12Q14669 1992 aaPredicted RBP19.26■□□□□ 0.67
SREK1-216ENST00000612404 K7ERI5 159 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 TGFB1I1O43294 461 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 CABYRO75952 493 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 FGFR1OPO95684 399 aaKnown RBP19.26■□□□□ 0.67
SREK1-216ENST00000612404 SERPINC1P01008 464 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 ADAM17P78536 824 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 EDRF1Q3B7T1 1238 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 FBXO46Q6PJ61 603 aaPredicted RBP19.26■□□□□ 0.67
SREK1-216ENST00000612404 FOXR2Q6PJQ5 311 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 RUFY4Q6ZNE9 571 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 MAP4K3Q8IVH8 894 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 ZBTB8OSQ8IWT0 167 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 SCLT1Q96NL6 688 aa19.26■□□□□ 0.67
SREK1-216ENST00000612404 PAK6Q9NQU5 681 aaPredicted RBP19.26■□□□□ 0.67
SREK1-216ENST00000612404 MAGEC2Q9UBF1 373 aaPredicted RBP19.26■□□□□ 0.67
SREK1-216ENST00000612404 MOXD2PA6NHM9 499 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 NR2F2P24468 414 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 FANCCQ00597 558 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 ADAM9Q13443 819 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 TAS1R3Q7RTX0 852 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 BICD1Q96G01 975 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 TSEN34Q9BSV6 310 aaKnown RBP19.25■□□□□ 0.67
SREK1-216ENST00000612404 GTF2IRD1Q9UHL9 959 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 SMIM35A0A1B0GVV1 85 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 KCNJ18B7U540 433 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 KBTBD13C9JR72 458 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 NR3C1P04150 777 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 SCP2P22307 547 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 EFNA5P52803 228 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 KCNJ12Q14500 433 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 LRRC55Q6ZSA7 311 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 IRF2BP1Q8IU81 584 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 GOLGA5Q8TBA6 731 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 NLRP7Q8WX94 980 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 GLT1D1Q96MS3 346 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 C2orf40Q9H1Z8 148 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 AGPAT3Q9NRZ7 376 aa19.25■□□□□ 0.67
SREK1-216ENST00000612404 HOXC8P31273 242 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 TMEM62Q0P6H9 643 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 CDCA2Q69YH5 1023 aaPredicted RBP19.24■□□□□ 0.67
SREK1-216ENST00000612404 GDF6Q6KF10 455 aaPredicted RBP19.24■□□□□ 0.67
SREK1-216ENST00000612404 FAM114A1Q8IWE2 563 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 ANKRD20A12PQ8NF67 263 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 PHLPP2Q6ZVD8 1323 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 A0A087WZ62 844 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 TISP43B9A030 160 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 HNRNPDLO14979 420 aaKnown RBP19.24■□□□□ 0.67
SREK1-216ENST00000612404 CETN3O15182 167 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 ADCY5O95622 1261 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 RPL13P26373 211 aaKnown RBP19.24■□□□□ 0.67
SREK1-216ENST00000612404 PHKA2P46019 1235 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 NLRP11P59045 1033 aaKnown RBP19.24■□□□□ 0.67
SREK1-216ENST00000612404 ITGA7Q13683 1181 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 TCP11X2Q5H9J9 407 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 SARM1Q6SZW1 724 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 DNAJB3Q8WWF6 145 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 CNOT6LQ96LI5 555 aaKnown RBP19.24■□□□□ 0.67
SREK1-216ENST00000612404 FDXACB1Q9BRP7 624 aaPredicted RBP19.24■□□□□ 0.67
SREK1-216ENST00000612404 TMEM134Q9H6X4 195 aa19.24■□□□□ 0.67
SREK1-216ENST00000612404 GRIN2DO15399 1336 aa19.23■□□□□ 0.67
SREK1-216ENST00000612404 INO80B-WBP1J3KQ70 363 aa19.23■□□□□ 0.67
SREK1-216ENST00000612404 CYP2J2P51589 502 aa19.23■□□□□ 0.67
SREK1-216ENST00000612404 SPAG1Q07617 926 aa19.23■□□□□ 0.67
SREK1-216ENST00000612404 PKN2Q16513 984 aaKnown RBP19.23■□□□□ 0.67
SREK1-216ENST00000612404 CEP63Q96MT8 703 aa19.23■□□□□ 0.67
SREK1-216ENST00000612404 INO80BQ9C086 356 aaPredicted RBP19.23■□□□□ 0.67
SREK1-216ENST00000612404 IFNKQ9P0W0 207 aa19.23■□□□□ 0.67
SREK1-216ENST00000612404 GINS2Q9Y248 185 aa19.23■□□□□ 0.67
SREK1-216ENST00000612404 USP20Q9Y2K6 914 aa19.23■□□□□ 0.67
SREK1-216ENST00000612404 A0A1W2PQ45 241 aaPredicted RBP19.22■□□□□ 0.67
SREK1-216ENST00000612404 A0A1W2PQY0 241 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 GPC3P51654 580 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 PTENP60484 403 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 MAPK6Q16659 721 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 KIZQ2M2Z5 673 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 IFT122Q9HBG6 1241 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 ANKRD63C9JTQ0 380 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 EEF1GP26641 437 aaKnown RBP19.22■□□□□ 0.67
SREK1-216ENST00000612404 LIG4P49917 911 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 UBASH3AP57075 661 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 CEP135Q66GS9 1140 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 ARMCX5Q6P1M9 558 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 SESTD1Q86VW0 696 aa19.22■□□□□ 0.67
SREK1-216ENST00000612404 PCIF1Q9H4Z3 704 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms