RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PRR12Q9ULL5 1215 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 SYNGAP1Q96PV0 1343 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 CNTNAP4Q9C0A0 1308 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 MIF4GDA9UHW6 222 aaKnown RBP7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 AGPSO00116 658 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 CLDN3O15551 220 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 HSPA6P17066 643 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 COMTP21964 271 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 PIK3CAP42336 1068 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 RHBDL3P58872 404 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 ADCY2Q08462 1091 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 LONRF1Q17RB8 773 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 TMEM119Q4V9L6 283 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 RNF207Q6ZRF8 634 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 DEPTORQ8TB45 409 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 FBXO25Q8TCJ0 367 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 RNF25Q96BH1 459 aaPredicted RBP7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 C18orf8Q96DM3 657 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 SEPT9Q9UHD8 586 aaPredicted RBP7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 GJA3Q9Y6H8 435 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 PITPNM2Q9BZ72 1349 aa7.38□□□□□ -1.23
SYNPO2-206ENST00000610556 DDTLA6NHG4 134 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 FAM86B1E9PN63 330 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 TULP2O00295 520 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 DDX3XO00571 662 aaKnown RBP eCLIP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 PODXLO00592 558 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 ZBED4O75132 1171 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 CAND2O75155 1236 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 FAM86B2P0C5J1 330 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 NPR1P16066 1061 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 SESN3P58005 492 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 BFSP1Q12934 665 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 SHROOM1Q2M3G4 852 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 HAUS6Q7Z4H7 955 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 CTAGE3PQ8IX95 158 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 C11orf70Q9BRQ4 267 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 ERP44Q9BS26 406 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 FBXO28Q9NVF7 368 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 RAB20Q9NX57 234 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 AIPL1Q9NZN9 384 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 PPP1R9AQ9ULJ8 1098 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 GOLGA8SH3BPF8 625 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 PJA2O43164 708 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 ECE2O60344 883 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 CD58P19256 250 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 SHMT1P34896 483 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 ECE1P42892 770 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 MTM1Q13496 603 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 ZNF449Q6P9G9 518 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 ARMC9Q7Z3E5 817 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 SP8Q8IXZ3 490 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 CCDC89Q8N998 374 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 GRK7Q8WTQ7 553 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 MAIP1Q8WWC4 291 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 RAPGEF5Q92565 580 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 XPO6Q96QU8 1125 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 ZNF341Q9BYN7 854 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 PPP1R12CQ9BZL4 782 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 RAVER2Q9HCJ3 691 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 AGPAT3Q9NRZ7 376 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 SUCLA2Q9P2R7 463 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 LOC102724159A0A0B4J2E5 919 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 RASSF10A6NK89 507 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 BRAFP15056 766 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 DESP17661 470 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 FECHP22830 423 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 CHRNA3P32297 505 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 SLC8A1P32418 973 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 NEDD9Q14511 834 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 PWP2Q15269 919 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 MTERF2Q49AM1 385 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 PODNQ7Z5L7 613 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 SLC20A1Q8WUM9 679 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 JDP2Q8WYK2 163 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 SLC35C1Q96A29 364 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 CALR3Q96L12 384 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 FAM213AQ9BRX8 229 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 TMBIM4Q9HC24 238 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 KLHL11Q9NVR0 708 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 GINS2Q9Y248 185 aa7.37□□□□□ -1.23
SYNPO2-206ENST00000610556 NID2Q14112 1375 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 EXOC1LA0A1B0GW35 172 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 DENND3A2RUS2 1198 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 FAM187AA6NFU0 413 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 GOLGA8MH3BSY2 632 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 SGK1O00141 431 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 EML1O00423 815 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 HNRNPH3P31942 346 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 GBP1P32455 592 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 POLGP54098 1239 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 ITIH3Q06033 890 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 MTMR1Q13613 665 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 BYSLQ13895 437 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 BRDTQ58F21 947 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 AADACL2Q6P093 401 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 LRIG3Q6UXM1 1119 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PPP1R21Q6ZMI0 780 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 LDHDQ86WU2 507 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms