RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 RASGRP2Q7LDG7 609 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 GPD1LQ8N335 351 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 CALR3Q96L12 384 aaKnown RBP15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 RBAKQ9NYW8 714 aaPredicted RBP15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 TOM1L1O75674 476 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 MMEP08473 750 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 TNFAIP2Q03169 654 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 MMEL1Q495T6 779 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 FAF2Q96CS3 445 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 JMJD4Q9H9V9 463 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 PREX1Q8TCU6 1659 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 SERPINB6P35237 376 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 VSNL1P62760 191 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 MTMR2Q13614 643 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 TLK1Q9UKI8 766 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 PRR12Q9ULL5 1215 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 TTC7AQ9ULT0 858 aaPredicted RBP15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 MAP3K14Q99558 947 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 TAF1DQ9H5J8 278 aaPredicted RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 TOPORSQ9NS56 1045 aaPredicted RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 AGO2Q9UKV8 859 aaKnown RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 STRIP2Q9ULQ0 834 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 SNX12Q9UMY4 172 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 GPR75-ASB3A0A0A6YYF3 556 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 TFDP2Q14188 446 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 SLC9A2Q9UBY0 812 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 ITSN1Q15811 1721 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 IQANK1A0A1B0GTG1 560 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 TBX3O15119 743 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 ZNF185O15231 689 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 ENTPD3O75355 529 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 CHRNA3P32297 505 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 ARL4CP56559 192 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 SLC18A3Q16572 532 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 LMBRD2Q68DH5 695 aaPredicted RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 ELAC2Q9BQ52 826 aaKnown RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 MRPL4Q9BYD3 311 aaKnown RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 CNTNAP4Q9C0A0 1308 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 COL3A1P02461 1466 aaPredicted RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 SLC16A3O15427 465 aaKnown RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 MAGOHP61326 146 aaKnown RBP15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 PLCB4Q15147 1175 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 DBN1Q16643 649 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 DEPDC1BQ8WUY9 529 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 C2orf40Q9H1Z8 148 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 PCSK1NQ9UHG2 260 aa15.23■□□□□ 0.03
PCDHB16-201ENST00000609684 ANKRD65E5RJM6 399 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 PMS2P54278 862 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 EN1Q05925 392 aaPredicted RBP15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 RBBP5Q15291 538 aaKnown RBP15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 E2F5Q15329 346 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 TTC13Q8NBP0 860 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 AGPAT1Q99943 283 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 TRIM10Q9UDY6 481 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 SLC12A6Q9UHW9 1150 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 MEGF6O75095 1541 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 SLC4A1P02730 911 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 TTLL4Q14679 1199 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 PTPAQ15257 358 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 HIBCHQ6NVY1 386 aaPredicted RBP15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 ENOSF1Q7L5Y1 443 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 KLC2Q9H0B6 622 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 JPH1Q9HDC5 661 aaPredicted RBP15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 ASNSD1Q9NWL6 643 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 ZNRF3Q9ULT6 936 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 HEY1Q9Y5J3 304 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 PFASO15067 1338 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 ARHGEF37A1IGU5 675 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 CYP26A1O43174 497 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 GYPCP04921 128 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 THOC5Q13769 683 aaKnown RBP15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 TRIM59Q8IWR1 403 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 RNF139Q8WU17 664 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 LRFN2Q9ULH4 789 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 SPATA31A5Q5VU36 1347 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 SPATA31A7Q8IWB4 1347 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 RASA4BC9J798 803 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 GOLGA8MH3BSY2 632 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 RASA4O43374 803 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 ARL13BQ3SXY8 428 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 COG1Q8WTW3 980 aa15.22■□□□□ 0.03
PCDHB16-201ENST00000609684 VGLL3A8MV65 326 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 M0QYV0 167 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 MYL3P08590 195 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 UCHL3P15374 230 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 PSMC1P62191 440 aaKnown RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 BZW1Q7L1Q6 419 aaKnown RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 PDCD7Q8N8D1 485 aaKnown RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 SKA2Q8WVK7 121 aaPredicted RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 GBP5Q96PP8 586 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 WNT8AQ9H1J5 351 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 SLITRK6Q9H5Y7 841 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 ACTR5Q9H9F9 607 aaPredicted RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 AMACRQ9UHK6 382 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 SSU72P8A0A1W2PR75 194 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 MYBP10242 640 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms