RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ZNF623O75123 536 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 OFD1O75665 1012 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 CDKL5O76039 1030 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 P4HBP07237 508 aaKnown RBP14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 SP100P23497 879 aaPredicted RBP14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 BMS1Q14692 1282 aaKnown RBP14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 TPRNQ4KMQ1 711 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 NOMO2Q5JPE7 1267 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 GLB1LQ6UWU2 654 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 TMEM173Q86WV6 379 aaPredicted RBP14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 OXER1Q8TDS5 423 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 PRPF31Q8WWY3 499 aaKnown RBP14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 AUTS2Q8WXX7 1259 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 IFT122Q9HBG6 1241 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 TBC1D13Q9NVG8 400 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 WRAP73Q9P2S5 460 aaPredicted RBP14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 INPP5FQ9Y2H2 1132 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 COL4A3BPQ9Y5P4 624 aa14.99□□□□□ -0.01
POLR2J3-219ENST00000608621 MARCH6O60337 910 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 GALTP07902 379 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 SRGAP2CP0DJJ0 459 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 GCFC2P16383 781 aaKnown RBP14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 XBP1P17861 261 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 MRE11P49959 708 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 RAB27AP51159 221 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 SIGLEC14Q08ET2 396 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 EPHA7Q15375 998 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 IER5LQ5T953 404 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 CES5AQ6NT32 575 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 PIK3AP1Q6ZUJ8 805 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 DDX53Q86TM3 631 aaKnown RBP14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 EXOC8Q8IYI6 725 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 TMEM87AQ8NBN3 555 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 SLC7A3Q8WY07 619 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 RSPH1Q8WYR4 309 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 HAS1Q92839 578 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 TMEM143Q96AN5 459 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 PGBD4Q96DM1 585 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 IGSF21Q96ID5 467 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 GBP3Q9H0R5 595 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 ZBP1Q9H171 429 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 ADAM7Q9H2U9 754 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 DHX33Q9H6R0 707 aaKnown RBP14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 RGL1Q9NZL6 768 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 TPCN1Q9ULQ1 816 aa14.98□□□□□ -0.01
POLR2J3-219ENST00000608621 ZBTB39O15060 712 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 TBX3O15119 743 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 PFKFB2O60825 505 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 POLGP54098 1239 aaPredicted RBP14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 ITIH3Q06033 890 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 PTPN21Q16825 1174 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 EARS2Q5JPH6 523 aaKnown RBP14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 KANK3Q6NY19 840 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 AGMOQ6ZNB7 445 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 OTUD6AQ7L8S5 288 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 SRGAP1Q7Z6B7 1085 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 MRPL10Q7Z7H8 261 aaKnown RBP14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 ZBTB33Q86T24 672 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 ZNF280BQ86YH2 543 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 SUGP1Q8IWZ8 645 aaKnown RBP14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 C4orf19Q8IY42 314 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 FBXL6Q8N531 539 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 C12orf76Q8N812 135 aaPredicted RBP14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 BCL7CQ8WUZ0 217 aaPredicted RBP14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 DYDC2Q96IM9 177 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 POMKQ9H5K3 350 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 MINDY3Q9H8M7 445 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 BMP2KQ9NSY1 1161 aaPredicted RBP14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 AGPAT5Q9NUQ2 364 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 DNAJB4Q9UDY4 337 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 PCDHB2Q9Y5E7 798 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 IRAK3Q9Y616 596 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 MYO10Q9HD67 2058 aa14.97□□□□□ -0.01
POLR2J3-219ENST00000608621 STK36Q9NRP7 1315 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 CARNS1A5YM72 827 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 DDHD2O94830 711 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 CTDNEP1O95476 244 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 WEE2P0C1S8 567 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 CTSAP10619 480 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 HOXA11P31270 313 aaPredicted RBP14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 YWHABP31946 246 aaKnown RBP14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 RFC5P40937 340 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 SLC11A1P49279 550 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 LAMTOR4Q0VGL1 99 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 XKR9Q5GH70 373 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 RARS2Q5T160 578 aaKnown RBP14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 NCAPH2Q6IBW4 605 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 POTEDQ86YR6 584 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 PRSS33Q8NF86 280 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 PSPC1Q8WXF1 523 aaKnown RBP14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 ASIC4Q96FT7 647 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 NAP1L4Q99733 375 aaKnown RBP14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 LXNQ9BS40 222 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 ORC3Q9UBD5 711 aaPredicted RBP14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 NR2E1Q9Y466 385 aa14.96□□□□□ -0.01
POLR2J3-219ENST00000608621 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms