RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 MRPL9Q9BYD2 267 aaKnown RBP24.46■■□□□ 1.51
TMEM248-207ENST00000607045 NRDE2Q9H7Z3 1164 aa24.46■■□□□ 1.51
TMEM248-207ENST00000607045 MINDY3Q9H8M7 445 aa24.46■■□□□ 1.51
TMEM248-207ENST00000607045 BMP2KQ9NSY1 1161 aaPredicted RBP24.46■■□□□ 1.51
TMEM248-207ENST00000607045 FAM105AQ9NUU6 356 aa24.46■■□□□ 1.51
TMEM248-207ENST00000607045 ZC3H11AO75152 810 aaKnown RBP eCLIP24.45■■□□□ 1.5
TMEM248-207ENST00000607045 FDPSP14324 419 aaKnown RBP24.45■■□□□ 1.5
TMEM248-207ENST00000607045 SMC1AQ14683 1233 aaKnown RBP24.45■■□□□ 1.5
TMEM248-207ENST00000607045 EPHA7Q15375 998 aa24.45■■□□□ 1.5
TMEM248-207ENST00000607045 VPS52Q8N1B4 723 aa24.45■■□□□ 1.5
TMEM248-207ENST00000607045 NECAB1Q8N987 351 aa24.45■■□□□ 1.5
TMEM248-207ENST00000607045 MFSD14AQ96MC6 490 aa24.45■■□□□ 1.5
TMEM248-207ENST00000607045 JPH2Q9BR39 696 aaPredicted RBP24.45■■□□□ 1.5
TMEM248-207ENST00000607045 DHX33Q9H6R0 707 aaKnown RBP24.45■■□□□ 1.5
TMEM248-207ENST00000607045 TBC1D13Q9NVG8 400 aa24.45■■□□□ 1.5
TMEM248-207ENST00000607045 ORC3Q9UBD5 711 aaPredicted RBP24.45■■□□□ 1.5
TMEM248-207ENST00000607045 INPP5FQ9Y2H2 1132 aa24.45■■□□□ 1.5
TMEM248-207ENST00000607045 COL4A3BPQ9Y5P4 624 aa24.45■■□□□ 1.5
TMEM248-207ENST00000607045 HCFC2Q9Y5Z7 792 aa24.45■■□□□ 1.5
TMEM248-207ENST00000607045 TMEM221A6NGB7 291 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 M0R296 226 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 MARCH6O60337 910 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 GALTP07902 379 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 SRGAP2BP0DMP2 458 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 GCFC2P16383 781 aaKnown RBP24.44■■□□□ 1.5
TMEM248-207ENST00000607045 XBP1P17861 261 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 SP100P23497 879 aaPredicted RBP24.44■■□□□ 1.5
TMEM248-207ENST00000607045 CA8P35219 290 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 AFF1P51825 1210 aaKnown RBP24.44■■□□□ 1.5
TMEM248-207ENST00000607045 AK2P54819 239 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 NR5A1Q13285 461 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 CTTNQ14247 550 aaKnown RBP24.44■■□□□ 1.5
TMEM248-207ENST00000607045 NOMO2Q5JPE7 1267 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 ALYREFQ86V81 257 aaKnown RBP24.44■■□□□ 1.5
TMEM248-207ENST00000607045 POTEDQ86YR6 584 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 BCL7CQ8WUZ0 217 aaPredicted RBP24.44■■□□□ 1.5
TMEM248-207ENST00000607045 TMEM169Q96HH4 297 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 DYDC2Q96IM9 177 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 PCDHB2Q9Y5E7 798 aa24.44■■□□□ 1.5
TMEM248-207ENST00000607045 STK36Q9NRP7 1315 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 TBX3O15119 743 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 B4GALT3O60512 393 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 SKIP12755 728 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 HOXB8P17481 243 aaPredicted RBP24.43■■□□□ 1.5
TMEM248-207ENST00000607045 HOXA11P31270 313 aaPredicted RBP24.43■■□□□ 1.5
TMEM248-207ENST00000607045 LAMTOR4Q0VGL1 99 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 NCAPH2Q6IBW4 605 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 KANK3Q6NY19 840 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 GLB1LQ6UWU2 654 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 ZNF280BQ86YH2 543 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 C4orf19Q8IY42 314 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 SLC7A3Q8WY07 619 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 PBXIP1Q96AQ6 731 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 IGSF21Q96ID5 467 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 LXNQ9BS40 222 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 GBP3Q9H0R5 595 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 DNAJB4Q9UDY4 337 aa24.43■■□□□ 1.5
TMEM248-207ENST00000607045 ZNF318Q5VUA4 2279 aa24.42■■□□□ 1.5
TMEM248-207ENST00000607045 DKC1O60832 514 aaKnown RBP eCLIP24.42■■□□□ 1.5
TMEM248-207ENST00000607045 YWHABP31946 246 aaKnown RBP24.42■■□□□ 1.5
TMEM248-207ENST00000607045 POLGP54098 1239 aaPredicted RBP24.42■■□□□ 1.5
TMEM248-207ENST00000607045 SPIRE1Q08AE8 756 aa24.42■■□□□ 1.5
TMEM248-207ENST00000607045 AGMOQ6ZNB7 445 aa24.42■■□□□ 1.5
TMEM248-207ENST00000607045 BMP8AQ7Z5Y6 402 aa24.42■■□□□ 1.5
TMEM248-207ENST00000607045 C12orf76Q8N812 135 aaPredicted RBP24.42■■□□□ 1.5
TMEM248-207ENST00000607045 CASP10Q92851 521 aa24.42■■□□□ 1.5
TMEM248-207ENST00000607045 ZBP1Q9H171 429 aa24.42■■□□□ 1.5
TMEM248-207ENST00000607045 AGPAT5Q9NUQ2 364 aa24.42■■□□□ 1.5
TMEM248-207ENST00000607045 ZDBF2Q9HCK1 2354 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 SLITRK3O94933 977 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 WEE2P0C1S8 567 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 SLC11A1P49279 550 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 NHLH1Q02575 133 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 CYP4A11Q02928 519 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 ME3Q16798 604 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 XKR9Q5GH70 373 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 UBXN11Q5T124 520 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 IER5LQ5T953 404 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 MRPL10Q7Z7H8 261 aaKnown RBP24.41■■□□□ 1.5
TMEM248-207ENST00000607045 DDX53Q86TM3 631 aaKnown RBP24.41■■□□□ 1.5
TMEM248-207ENST00000607045 TPH2Q8IWU9 490 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 PSPC1Q8WXF1 523 aaKnown RBP24.41■■□□□ 1.5
TMEM248-207ENST00000607045 TNFRSF25Q93038 417 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 VN1R3Q9BXE9 311 aa24.41■■□□□ 1.5
TMEM248-207ENST00000607045 DDHD2O94830 711 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 LARGE1O95461 756 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 RFC5P40937 340 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 RAB27AP51159 221 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 RNASELQ05823 741 aaKnown RBP24.4■■□□□ 1.5
TMEM248-207ENST00000607045 OTUD6AQ7L8S5 288 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 SRGAP1Q7Z6B7 1085 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 FEZF2Q8TBJ5 459 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 PGBD4Q96DM1 585 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 ADAM7Q9H2U9 754 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 ZSWIM4Q9H7M6 989 aa24.4■■□□□ 1.5
TMEM248-207ENST00000607045 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.39■■□□□ 1.49
TMEM248-207ENST00000607045 CTSAP10619 480 aa24.39■■□□□ 1.49
TMEM248-207ENST00000607045 EPCAMP16422 314 aa24.39■■□□□ 1.49
TMEM248-207ENST00000607045 EMC2Q15006 297 aa24.39■■□□□ 1.49
TMEM248-207ENST00000607045 TPRNQ4KMQ1 711 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms