RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 RNF19AQ9NV58 838 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 TYW1Q9NV66 732 aaKnown RBP15.99■□□□□ 0.15
TUBE1-208ENST00000604743 LMCD1Q9NZU5 365 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 DNM3Q9UQ16 869 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 PLXNA4Q9HCM2 1894 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 UNC80Q8N2C7 3258 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 C5orf67F2Z3F1 127 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 GRM6O15303 877 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 EOMESO95936 686 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 ATF7P17544 494 aaPredicted RBP15.98■□□□□ 0.15
TUBE1-208ENST00000604743 CYP11B2P19099 503 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 CEBPZQ03701 1054 aaKnown RBP15.98■□□□□ 0.15
TUBE1-208ENST00000604743 RESTQ13127 1097 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 ARL6IP4Q66PJ3 421 aaKnown RBP15.98■□□□□ 0.15
TUBE1-208ENST00000604743 ZNF598Q86UK7 904 aaKnown RBP15.98■□□□□ 0.15
TUBE1-208ENST00000604743 CPB2Q96IY4 423 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 CASD1Q96PB1 797 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 C11orf84Q9BUA3 381 aaPredicted RBP15.98■□□□□ 0.15
TUBE1-208ENST00000604743 TMEM117Q9H0C3 514 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 FAM105AQ9NUU6 356 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 MTMR6Q9Y217 621 aa15.98■□□□□ 0.15
TUBE1-208ENST00000604743 STX6O43752 255 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 EYA4O95677 639 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 SSBP05455 408 aaKnown RBP eCLIP15.97■□□□□ 0.15
TUBE1-208ENST00000604743 SKIP12755 728 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 LIG1P18858 919 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 MBTD1Q05BQ5 628 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 CLLU1OSQ5K130 101 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 KCNK18Q7Z418 384 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 PIAS4Q8N2W9 510 aaPredicted RBP15.97■□□□□ 0.15
TUBE1-208ENST00000604743 KLHL23Q8NBE8 558 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 BSNDQ8WZ55 320 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 MRPL38Q96DV4 380 aaKnown RBP15.97■□□□□ 0.15
TUBE1-208ENST00000604743 CDK5RAP3Q96JB5 506 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 PLVAPQ9BX97 442 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 THEGQ9P2T0 379 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 PCDHB12Q9Y5F1 795 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 CLIC4Q9Y696 253 aa15.97■□□□□ 0.15
TUBE1-208ENST00000604743 MYH15Q9Y2K3 1946 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 MEIS3P2A8K0S8 358 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 TSPAN1O60635 241 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 BMP15O95972 392 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 HOXA11P31270 313 aaPredicted RBP15.96■□□□□ 0.15
TUBE1-208ENST00000604743 RAB27AP51159 221 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 POU5F1BQ06416 359 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 NCBP1Q09161 790 aaKnown RBP15.96■□□□□ 0.15
TUBE1-208ENST00000604743 FOXD4L5Q5VV16 416 aaPredicted RBP15.96■□□□□ 0.15
TUBE1-208ENST00000604743 LRRC55Q6ZSA7 311 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 CABP7Q86V35 215 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 IFNLR1Q8IU57 520 aaPredicted RBP15.96■□□□□ 0.15
TUBE1-208ENST00000604743 ZBTB8OSQ8IWT0 167 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 FOXD4L4Q8WXT5 416 aaPredicted RBP15.96■□□□□ 0.15
TUBE1-208ENST00000604743 PNMA5Q96PV4 448 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 CWH43Q9H720 699 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 AAASQ9NRG9 546 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 PLAGL2Q9UPG8 496 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 INPP5FQ9Y2H2 1132 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 PCDHB2Q9Y5E7 798 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 TCF20Q9UGU0 1960 aaKnown RBP15.96■□□□□ 0.15
TUBE1-208ENST00000604743 BRWD1Q9NSI6 2320 aa15.96■□□□□ 0.15
TUBE1-208ENST00000604743 A0A0C4DFX4 3053 aa15.96■□□□□ 0.14
TUBE1-208ENST00000604743 B4GALT5O43286 388 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 ITGB1P05556 798 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 MARCKSP29966 332 aaPredicted RBP15.95■□□□□ 0.14
TUBE1-208ENST00000604743 AXLP30530 894 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 GRIN1Q05586 938 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 TMEM132AQ24JP5 1023 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 UBXN11Q5T124 520 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 NOTUMQ6P988 496 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 CDR2LQ86X02 465 aaPredicted RBP15.95■□□□□ 0.14
TUBE1-208ENST00000604743 THNSL1Q8IYQ7 743 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 LRRC43Q8N309 656 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 COLGALT1Q8NBJ5 622 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 DEPTORQ8TB45 409 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 P2RX5Q93086 422 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 PGBD4Q96DM1 585 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 IFT74Q96LB3 600 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 TRAIPQ9BWF2 469 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 EIF2AQ9BY44 585 aaKnown RBP15.95■□□□□ 0.14
TUBE1-208ENST00000604743 NT5C3AQ9H0P0 336 aa15.95■□□□□ 0.14
TUBE1-208ENST00000604743 ZNF623O75123 536 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 ARF4P18085 180 aaPredicted RBP15.94■□□□□ 0.14
TUBE1-208ENST00000604743 LAG3P18627 525 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 PBX3P40426 434 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 UBA7P41226 1012 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 TFF2Q03403 129 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 RAD51AP2Q09MP3 1159 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 PCBP1Q15365 356 aaKnown RBP eCLIP15.94■□□□□ 0.14
TUBE1-208ENST00000604743 AMHR2Q16671 573 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 TIGD5Q53EQ6 642 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 TCEAL5Q5H9L2 206 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 RINT1Q6NUQ1 792 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 EP400NLQ6ZTU2 488 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 RASSF8Q8NHQ8 419 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 SPPL3Q8TCT6 385 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 POF1BQ8WVV4 589 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 CALML4Q96GE6 196 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 KIFC3Q9BVG8 833 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 RUSC1Q9BVN2 902 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 APOL6Q9BWW8 343 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms