RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 FAM102BQ5T8I3 360 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 NOTUMQ6P988 496 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 GLB1LQ6UWU2 654 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 KIFAP3Q92845 792 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 HLA-CQ95604 372 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 CDK5RAP3Q96JB5 506 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 UBN1Q9NPG3 1134 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 FAM105AQ9NUU6 356 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 DDX19AQ9NUU7 478 aaKnown RBP12.81□□□□□ -0.36
CCDC12-209ENST00000604164 KCNG1Q9UIX4 513 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 KIAA1024Q9UPX6 916 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 COL6A3P12111 3177 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 CHD9Q3L8U1 2897 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 LRRIQ4A6NIV6 560 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 EYA4O95677 639 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 LINC00271P0C7V0 271 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 FGFR1P11362 822 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 GLRA2P23416 452 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 CAPSQ13938 189 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 TJAP1Q5JTD0 557 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 PDE12Q6L8Q7 609 aaKnown RBP12.8□□□□□ -0.36
CCDC12-209ENST00000604164 ZNF598Q86UK7 904 aaKnown RBP12.8□□□□□ -0.36
CCDC12-209ENST00000604164 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 CASD1Q96PB1 797 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 TIPINQ9BVW5 301 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 BHMT2Q9H2M3 363 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 ZSCAN16Q9H4T2 348 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-209ENST00000604164 NSUN3Q9H649 340 aaKnown RBP12.8□□□□□ -0.36
CCDC12-209ENST00000604164 TYW1Q9NV66 732 aaKnown RBP12.8□□□□□ -0.36
CCDC12-209ENST00000604164 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
CCDC12-209ENST00000604164 PLAGL2Q9UPG8 496 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 PHLPP2Q6ZVD8 1323 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 CNTNAP2Q9UHC6 1331 aa12.8□□□□□ -0.36
CCDC12-209ENST00000604164 ARID2Q68CP9 1835 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 FSD2A1L4K1 749 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 VWA3AA6NCI4 1184 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 SYT1P21579 422 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 NAMPTP43490 491 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 GATMP50440 423 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 EFNA5P52803 228 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 KRT17Q04695 432 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 BMS1Q14692 1282 aaKnown RBP12.79□□□□□ -0.36
CCDC12-209ENST00000604164 MAEAQ7L5Y9 396 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 THNSL1Q8IYQ7 743 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 KLHL23Q8NBE8 558 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 COLGALT1Q8NBJ5 622 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 DEPTORQ8TB45 409 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 URGCPQ8TCY9 931 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 ASAP3Q8TDY4 903 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 DRC1Q96MC2 740 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 ZNF558Q96NG5 402 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 TRIM6Q9C030 488 aaPredicted RBP12.79□□□□□ -0.36
CCDC12-209ENST00000604164 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
CCDC12-209ENST00000604164 KANSL3Q9P2N6 904 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 PCDHB2Q9Y5E7 798 aa12.79□□□□□ -0.36
CCDC12-209ENST00000604164 COL4A4P53420 1690 aaPredicted RBP12.79□□□□□ -0.36
CCDC12-209ENST00000604164 CHD7Q9P2D1 2997 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 A0A087WWV3 80 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 RBAK-RBAKDNI3L0D1 243 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 TSPAN1O60635 241 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 HOXA11P31270 313 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-209ENST00000604164 LONP1P36776 959 aaKnown RBP12.78□□□□□ -0.36
CCDC12-209ENST00000604164 UBA7P41226 1012 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 ALDH7A1P49419 539 aaKnown RBP12.78□□□□□ -0.36
CCDC12-209ENST00000604164 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 MAPK6Q16659 721 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 HYIQ5T013 277 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 CDCA2Q69YH5 1023 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-209ENST00000604164 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-209ENST00000604164 CALML4Q96GE6 196 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 CSRNP2Q9H175 543 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 C17orf75Q9HAS0 396 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 KCND2Q9NZV8 630 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 STK39Q9UEW8 545 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 LZTS1Q9Y250 596 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
CCDC12-209ENST00000604164 CDH23Q9H251 3354 aa12.77□□□□□ -0.36
CCDC12-209ENST00000604164 GRM6O15303 877 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 STX6O43752 255 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 FGF18O76093 207 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 ITGB1P05556 798 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-209ENST00000604164 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
CCDC12-209ENST00000604164 PLCB3Q01970 1234 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 RNASELQ05823 741 aaKnown RBP12.77□□□□□ -0.37
CCDC12-209ENST00000604164 SF3A1Q15459 793 aaKnown RBP12.77□□□□□ -0.37
CCDC12-209ENST00000604164 ZRSR1Q15695 479 aaKnown RBP12.77□□□□□ -0.37
CCDC12-209ENST00000604164 IL17AQ16552 155 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 FAM187BQ17R55 369 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 NOMO2Q5JPE7 1267 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 CLLU1OSQ5K130 101 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 SLC27A1Q6PCB7 646 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 MRPL10Q7Z7H8 261 aaKnown RBP12.77□□□□□ -0.37
CCDC12-209ENST00000604164 RASSF8Q8NHQ8 419 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms