RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PDXDC2PQ6P474 469 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 ZBED8Q8IZ13 594 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 TRIM45Q9H8W5 580 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 CCDC22O60826 627 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 ARPP19P56211 112 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PTK2BQ14289 1009 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 DMC1Q14565 340 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 TBC1D9BQ66K14 1250 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 LCORLQ8N3X6 602 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 STX19Q8N4C7 294 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 IL17REQ8NFR9 667 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 SLC26A7Q8TE54 656 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 SEL1LQ9UBV2 794 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 K7ERI5 159 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PGM1P36871 562 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 ZNF667Q5HYK9 610 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PLD3Q8IV08 490 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PPP1R16BQ96T49 567 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 OSBPL5Q9H0X9 879 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 TBC1D23Q9NUY8 699 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PKD2L2Q9NZM6 624 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 KRT7P08729 469 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 ALDH18A1P54886 795 aaKnown RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 FASTKD1Q53R41 847 aaKnown RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 DDIASQ8IXT1 998 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 GPBP1L1Q9HC44 474 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 AURKCQ9UQB9 309 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 MARK3P27448 753 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 MXD3Q9BW11 206 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PATL1Q86TB9 770 aaKnown RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PUS3Q9BZE2 481 aaKnown RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PAIP2BQ9ULR5 123 aaKnown RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 BNIP3LO60238 219 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 SUPT3HO75486 399 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 INPP5AQ14642 412 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 CYTH1Q15438 398 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 RNF219Q5W0B1 726 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 WNT8AQ9H1J5 351 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 EML4Q9HC35 981 aaKnown RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 GPR108Q9NPR9 543 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 S100A5P33763 92 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 CYGBQ8WWM9 190 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ZFYVE19Q96K21 471 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 BHMT2Q9H2M3 363 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 LZTS1Q9Y250 596 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 PRR23D1E9PI22 279 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ASAP2O43150 1006 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 NCK2O43639 380 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 PRR23D2P0DMB1 279 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 JAK3P52333 1124 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 HIF1AQ16665 826 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 RFX8Q6ZV50 586 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ADCK1Q86TW2 530 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ARL8AQ96BM9 186 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 IFT43Q96FT9 208 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 AIFM3Q96NN9 605 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 NINQ8N4C6 2090 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 F5H423 210 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ZNF555Q8NEP9 628 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 MTRQ99707 1265 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ITM2BQ9Y287 266 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 DEAF1O75398 565 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 USP17L8P0C7I0 530 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 MAPRE2Q15555 327 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 TJAP1Q5JTD0 557 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 TTC30BQ8N4P2 665 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 CYFIP2Q96F07 1278 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ITSN1Q15811 1721 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 ADGRL2O95490 1459 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 A0A1B0GW55 424 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 WDR47O94967 919 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 DUX4L2P0CJ85 424 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 DUX4L3P0CJ86 424 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 DUX4L4P0CJ87 422 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 DUX4L5P0CJ88 424 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 DUX4L6P0CJ89 424 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 DUX4L7P0CJ90 424 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 PDIA2Q13087 525 aaKnown RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 SARS2Q9NP81 518 aaKnown RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 DUX4Q9UBX2 424 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 PBXIP1Q96AQ6 731 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 OTULINQ96BN8 352 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 RUBCNLQ9H714 662 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 UBE4BO95155 1302 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 CYP2D7A0A087X1C5 515 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 MYBL1P10243 752 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 BRAFP15056 766 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 UBE2SQ16763 222 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 PROSER3Q2NL68 480 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 PIGOQ8TEQ8 1089 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 PDCD6IPQ8WUM4 868 aaKnown RBP10.19□□□□□ -0.78
CSMD1-217ENST00000602723 SLITRK6Q9H5Y7 841 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 BICRAQ9NZM4 1560 aa10.19□□□□□ -0.78
CSMD1-217ENST00000602723 TFDP2Q14188 446 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 RNF135Q8IUD6 432 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms