RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
SFXN2-208ENST00000602660 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.75■□□□□ 0.43
SFXN2-208ENST00000602660 PP2D1A8MPX8 630 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 ZNF623O75123 536 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 MUTP22033 750 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 KCNQ1P51787 676 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 ATP2C1P98194 919 aaPredicted RBP17.75■□□□□ 0.43
SFXN2-208ENST00000602660 PDIA5Q14554 519 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 MXD4Q14582 209 aaPredicted RBP17.75■□□□□ 0.43
SFXN2-208ENST00000602660 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 RILPL1Q5EBL4 403 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 TCEAL5Q5H9L2 206 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 UBXN11Q5T124 520 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 LARP1BQ659C4 914 aaKnown RBP17.75■□□□□ 0.43
SFXN2-208ENST00000602660 TWF2Q6IBS0 349 aaKnown RBP17.75■□□□□ 0.43
SFXN2-208ENST00000602660 LPPQ93052 612 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 MMTAG2Q9BU76 263 aaKnown RBP17.75■□□□□ 0.43
SFXN2-208ENST00000602660 POLR3FQ9H1D9 316 aaPredicted RBP17.75■□□□□ 0.43
SFXN2-208ENST00000602660 LRWD1Q9UFC0 647 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 MYO10Q9HD67 2058 aa17.75■□□□□ 0.43
SFXN2-208ENST00000602660 VWA8A3KMH1 1905 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 H3BQV1 296 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 LAD1O00515 517 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 HOXA2O43364 376 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 BMP1P13497 986 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 CCT6AP40227 531 aaKnown RBP17.74■□□□□ 0.43
SFXN2-208ENST00000602660 MBTD1Q05BQ5 628 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 POU5F1BQ06416 359 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 AMHR2Q16671 573 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 HAUS3Q68CZ6 603 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 COLGALT1Q8NBJ5 622 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 RNF169Q8NCN4 708 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 ERMNQ8TAM6 284 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 HELQQ8TDG4 1101 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 HLA-CQ95604 372 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 NSUN3Q9H649 340 aaKnown RBP17.74■□□□□ 0.43
SFXN2-208ENST00000602660 DOCK6Q96HP0 2047 aa17.74■□□□□ 0.43
SFXN2-208ENST00000602660 PLXNA3P51805 1871 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 TSPAN1O60635 241 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 CDC25AP30304 524 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 IRS1P35568 1242 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 LRRC43Q8N309 656 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 BSNDQ8WZ55 320 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 CCDC43Q96MW1 224 aaKnown RBP17.73■□□□□ 0.43
SFXN2-208ENST00000602660 NFKBIZQ9BYH8 718 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 UBE2ZQ9H832 354 aaPredicted RBP17.73■□□□□ 0.43
SFXN2-208ENST00000602660 ANK1P16157 1881 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 C2orf16Q68DN1 1984 aa17.73■□□□□ 0.43
SFXN2-208ENST00000602660 RAB27AP51159 221 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 LONRF3Q496Y0 759 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 PADI6Q6TGC4 694 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 AGMOQ6ZNB7 445 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 MAEAQ7L5Y9 396 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 MRPL10Q7Z7H8 261 aaKnown RBP17.72■□□□□ 0.43
SFXN2-208ENST00000602660 MCPH1Q8NEM0 835 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 SNX29Q8TEQ0 813 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 POF1BQ8WVV4 589 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 KIAA1024Q9UPX6 916 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 PCDHB2Q9Y5E7 798 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 PCDHGC5Q9Y5F6 944 aa17.72■□□□□ 0.43
SFXN2-208ENST00000602660 B4GALT3O60512 393 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 FGF18O76093 207 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 CSPG5O95196 566 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 LAG3P18627 525 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 CYP11B2P19099 503 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 GTF2F1P35269 517 aaKnown RBP eCLIP17.71■□□□□ 0.43
SFXN2-208ENST00000602660 LTBRP36941 435 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 PBX3P40426 434 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 HYAL1Q12794 435 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 TFDP1Q14186 410 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 SPOUT1Q5T280 376 aaKnown RBP17.71■□□□□ 0.43
SFXN2-208ENST00000602660 CDCA2Q69YH5 1023 aaPredicted RBP17.71■□□□□ 0.43
SFXN2-208ENST00000602660 KCNT2Q6UVM3 1135 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 KCNK18Q7Z418 384 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 ADGRD2Q7Z7M1 963 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 ABI1Q8IZP0 508 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 SMG8Q8ND04 991 aaKnown RBP17.71■□□□□ 0.43
SFXN2-208ENST00000602660 CPB2Q96IY4 423 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 BHMT2Q9H2M3 363 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 DDX19AQ9NUU7 478 aaKnown RBP17.71■□□□□ 0.43
SFXN2-208ENST00000602660 PCDHB12Q9Y5F1 795 aa17.71■□□□□ 0.43
SFXN2-208ENST00000602660 ARHGEF35A5YM69 484 aa17.7■□□□□ 0.42
SFXN2-208ENST00000602660 INO80B-WBP1J3KQ70 363 aa17.7■□□□□ 0.42
SFXN2-208ENST00000602660 B4GALT5O43286 388 aa17.7■□□□□ 0.42
SFXN2-208ENST00000602660 OFD1O75665 1012 aa17.7■□□□□ 0.42
SFXN2-208ENST00000602660 ARF4P18085 180 aaPredicted RBP17.7■□□□□ 0.42
SFXN2-208ENST00000602660 PCBP1Q15365 356 aaKnown RBP eCLIP17.7■□□□□ 0.42
SFXN2-208ENST00000602660 CTC1Q2NKJ3 1217 aa17.7■□□□□ 0.42
SFXN2-208ENST00000602660 SYMPKQ92797 1274 aaKnown RBP17.7■□□□□ 0.42
SFXN2-208ENST00000602660 PABPC5Q96DU9 382 aaKnown RBP17.7■□□□□ 0.42
SFXN2-208ENST00000602660 EIF2AQ9BY44 585 aaKnown RBP17.7■□□□□ 0.42
SFXN2-208ENST00000602660 RAB34Q9BZG1 259 aa17.7■□□□□ 0.42
SFXN2-208ENST00000602660 POLD4Q9HCU8 107 aa17.7■□□□□ 0.42
SFXN2-208ENST00000602660 AAASQ9NRG9 546 aa17.7■□□□□ 0.42
SFXN2-208ENST00000602660 TTLL13PA6NNM8 815 aa17.69■□□□□ 0.42
SFXN2-208ENST00000602660 E9PMD0 336 aa17.69■□□□□ 0.42
SFXN2-208ENST00000602660 ERLIN2O94905 339 aa17.69■□□□□ 0.42
SFXN2-208ENST00000602660 SKIP12755 728 aa17.69■□□□□ 0.42
SFXN2-208ENST00000602660 AXLP30530 894 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms