RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 FAM47EQ6ZV65 393 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 FAM207AQ9NSI2 230 aaPredicted RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 EXOC1Q9NV70 894 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 HERC5Q9UII4 1024 aaKnown RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 PCDHA13Q9Y5I0 950 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 SMCHD1A6NHR9 2005 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 PFDN1O60925 122 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 PRCPP42785 496 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 NUGGCQ68CJ6 796 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 CHADLQ6NUI6 762 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 RNF10Q8N5U6 811 aaKnown RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 ATG4CQ96DT6 458 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 OTUD5Q96G74 571 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 IFT74Q96LB3 600 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 RPS6KC1Q96S38 1066 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 VCXQ9H320 206 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 FBXL5Q9UKA1 691 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 ECM1Q16610 540 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 SEPT14Q6ZU15 432 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 FGD4Q96M96 766 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 GSDMAQ96QA5 445 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 RPAP3Q9H6T3 665 aaPredicted RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 RHBDL2Q9NX52 303 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 DOCK2Q92608 1830 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 MYH8P13535 1937 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 FAM86B1E9PN63 330 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 FAM86B2P0C5J1 330 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 DRD4P21917 467 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 GBP1P32455 592 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 STK4Q13043 487 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 MUM1Q2TAK8 710 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 ACBD5Q5T8D3 534 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 LRRC34Q8IZ02 419 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 GALNT15Q8N3T1 639 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 C4orf32Q8N8J7 132 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 CCDC97Q96F63 343 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 DPH5Q9H2P9 285 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 NDST4Q9H3R1 872 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 SH3GLB2Q9NR46 395 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 PSMC6P62333 389 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 TNNC1P63316 161 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 NT5DC1Q5TFE4 455 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 CACNA2D4Q7Z3S7 1137 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 RIC8AQ9NPQ8 531 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 INTS9Q9NV88 658 aaKnown RBP16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 TRIM33Q9UPN9 1127 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 AGAP1Q9UPQ3 857 aa16.56■□□□□ 0.24
PPFIA3-206ENST00000602655 PMS1P54277 932 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 CCDC6Q16204 474 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 GADL1Q6ZQY3 521 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 NOX5Q96PH1 765 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 MMADHCQ9H3L0 296 aaPredicted RBP16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 RMI1Q9H9A7 625 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 TMEM150BA6NC51 233 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 MEIS2O14770 477 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 CETN3O15182 167 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 RAD51CO43502 376 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 ARID5AQ03989 594 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 BYSLQ13895 437 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 NAALADL2Q58DX5 795 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 CAPN11Q9UMQ6 739 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 ATP8A1Q9Y2Q0 1164 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 KRT16P08779 473 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 CHN1P15882 459 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 ALDH3A1P30838 453 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 EIF4A3P38919 411 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 DHX9Q08211 1270 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 BIRC3Q13489 604 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 SV2BQ7L1I2 683 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 SULF1Q8IWU6 871 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 CHURC1Q8WUH1 139 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 NSRP1Q9H0G5 558 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 MYH1P12882 1939 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 A0A1B0GUL6 1792 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 ARAP2Q8WZ64 1704 aa16.55■□□□□ 0.24
PPFIA3-206ENST00000602655 ATP6V1G1O75348 118 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 SHBGP04278 402 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 MSH2P43246 934 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 TUBP50607 506 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 KLC1Q07866 573 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 ZNF844Q08AG5 666 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 IFI16Q16666 785 aaKnown RBP16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 HERC4Q5GLZ8 1057 aaPredicted RBP16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 KSR1Q8IVT5 923 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 IKZF4Q9H2S9 585 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 ELP3Q9H9T3 547 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 SLC12A6Q9UHW9 1150 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 POLR2MP0CAP2 368 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms