RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 ANTXR2P58335 489 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 TBC1D1Q86TI0 1168 aaPredicted RBP12.91□□□□□ -0.34
PTPN23-206ENST00000602307 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 FAM167AQ96KS9 214 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 POLR3FQ9H1D9 316 aaPredicted RBP12.91□□□□□ -0.34
PTPN23-206ENST00000602307 ABCF3Q9NUQ8 709 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 ARL13BQ3SXY8 428 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 CEP55Q53EZ4 464 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 RBM41Q96IZ5 413 aaKnown RBP12.91□□□□□ -0.34
PTPN23-206ENST00000602307 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 PITPNM3Q9BZ71 974 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 Q9H521 79 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 IQANK1A0A1B0GTG1 560 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 RASA4BC9J798 803 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 RASA4O43374 803 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 PHF20Q9BVI0 1012 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 UBE4BO95155 1302 aa12.91□□□□□ -0.34
PTPN23-206ENST00000602307 A0A0G2JND7 137 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 TTC4O95801 387 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 SMAD1Q15797 465 aaKnown RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 AP1ARQ63HQ0 302 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 EXT2Q93063 718 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 CHMP6Q96FZ7 201 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 SEL1LQ9UBV2 794 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 USP42Q9H9J4 1324 aaKnown RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 SETSIPP0DME0 302 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 ESRRAP11474 423 aaPredicted RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 GNA15P30679 374 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 SFNP31947 248 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 PHKA2P46019 1235 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 TOPORSQ9NS56 1045 aaPredicted RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 PI4K2BG5E9Z4 385 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 PMLP29590 882 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 GPC3P51654 580 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 HMGCS2P54868 508 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 ARL4CP56559 192 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 ZNF34Q8IZ26 560 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 SDCCAG3Q96C92 435 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 KLC2Q9H0B6 622 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 KLHL8Q9P2G9 620 aaPredicted RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 LIMA1Q9UHB6 759 aaKnown RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 TADA3O75528 432 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 ANXA13P27216 316 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 COG7P83436 770 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 DDX27Q96GQ7 796 aaKnown RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 DIS3Q9Y2L1 958 aaKnown RBP12.9□□□□□ -0.34
PTPN23-206ENST00000602307 MRFAP1Q9Y605 127 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 TMEM131LA2VDJ0 1609 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 MYOM1P52179 1685 aa12.9□□□□□ -0.34
PTPN23-206ENST00000602307 KRT37O76014 449 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 CSF1RP07333 972 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 PSMC1P62191 440 aaKnown RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 STK4Q13043 487 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 TFDP2Q14188 446 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 SCN4BQ8IWT1 228 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 FLT1P17948 1338 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 USP32Q8NFA0 1604 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 A0A1W2PQC6 194 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 M0QYV0 167 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 TMPRSS15P98073 1019 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 PDXDC1Q6P996 788 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 TRIM59Q8IWR1 403 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 HIPK4Q8NE63 616 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 TPX2Q9ULW0 747 aaKnown RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 CAPN11Q9UMQ6 739 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 FDPSP14324 419 aaKnown RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 MX2P20592 715 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 KCNB1Q14721 858 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 C1orf54Q8WWF1 131 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 PRPF31Q8WWY3 499 aaKnown RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 CCSER1Q9C0I3 900 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 RBAKQ9NYW8 714 aaPredicted RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 PCDHA10Q9Y5I2 948 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 ADAMTS13Q76LX8 1427 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 COL3A1P02461 1466 aaPredicted RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 HUS1O60921 280 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 CAMTA2O94983 1202 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 CALB1P05937 261 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■■■■□ 21.5
PTPN23-206ENST00000602307 RPAP3Q9H6T3 665 aaPredicted RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 ACAD9Q9H845 621 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 TXLNGQ9NUQ3 528 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 ASNSD1Q9NWL6 643 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 PPP1R9AQ9ULJ8 1098 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 SCAF8Q9UPN6 1271 aaKnown RBP12.89□□□□□ -0.35
PTPN23-206ENST00000602307 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
PTPN23-206ENST00000602307 COPEO14579 308 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 EYA4O95677 639 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 NDUFB10O96000 172 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 EPHA7Q15375 998 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 GIMAP8Q8ND71 665 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms