RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	ROM1	Q03395	351 aa		6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	ARHGAP44	Q17R89	818 aa		6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	CATSPERE	Q5SY80	951 aa		6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	FAM111B	Q6SJ93	734 aa		6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	ZNF627	Q7L945	461 aa		6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	BCL6B	Q8N143	479 aa	Predicted RBP	6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	AGAP2	Q99490	1192 aa		6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	HECA	Q9UBI9	543 aa	Predicted RBP	6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	CCDC9	Q9Y3X0	531 aa	Known RBP	6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	SAMD9	Q5K651	1589 aa		6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	MED14	O60244	1454 aa		6.21	□□□□□ -1.42
FARP1-238	ENST00000602015	LRRC7	Q96NW7	1537 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	NEURL4	Q96JN8	1562 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	FOXN1	O15353	648 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	PPFIA4	O75335	1185 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	IRF9	Q00978	393 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	SAFB2	Q14151	953 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	DGKD	Q16760	1214 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	TM4SF20	Q53R12	229 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	MFSD5	Q6N075	450 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	HAS1	Q92839	578 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	ERCC4	Q92889	916 aa	Predicted RBP	6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	TTPAL	Q9BTX7	342 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	BOC	Q9BWV1	1114 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	SFMBT1	Q9UHJ3	866 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	A2ML1	A8K2U0	1454 aa		6.2	□□□□□ -1.42
FARP1-238	ENST00000602015	DNMT1	P26358	1616 aa	Known RBP	6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	RHOBTB3	O94955	611 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	ATP2B1	P20020	1258 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	SCNN1G	P51170	649 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	BPIFB4	P59827	614 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	ELAVL1	Q15717	326 aa	Known RBP	6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	LAIR1	Q6GTX8	287 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	PCSK4	Q6UW60	755 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	GAREM2	Q75VX8	874 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	RTN4RL1	Q86UN2	441 aa	Predicted RBP	6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	ANKRD53	Q8N9V6	530 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	FOXRED1	Q96CU9	486 aa	Predicted RBP	6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	TCF25	Q9BQ70	676 aa		6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	RBM8A	Q9Y5S9	174 aa	Known RBP	6.19	□□□□□ -1.42
FARP1-238	ENST00000602015	ABCA6	Q8N139	1617 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	MYO3A	Q8NEV4	1616 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	GOLGA6L6	A8MZA4	724 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	MAFG	O15525	162 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	KCNQ2	O43526	872 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	RASGRP1	O95267	797 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	TCIRG1	Q13488	830 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	TMEM177	Q53S58	311 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015		Q6ZRM9	215 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	OTOP1	Q7RTM1	612 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	RPL10L	Q96L21	214 aa	Known RBP	6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	GPR87	Q9BY21	358 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	MRPL4	Q9BYD3	311 aa	Known RBP	6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	NRDE2	Q9H7Z3	1164 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	KCMF1	Q9P0J7	381 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	XDH	P47989	1333 aa		6.18	□□□□□ -1.42
FARP1-238	ENST00000602015	C2orf78	A6NCI8	922 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	DAPK3	O43293	454 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	MFAP3L	O75121	409 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	IPO13	O94829	963 aa	Known RBP	6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	TGM1	P22735	817 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	SLC25A3	Q00325	362 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	TOB2	Q14106	344 aa	Predicted RBP	6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	FSTL4	Q6MZW2	842 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	DPY19L2P1	Q6NXN4	242 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	NME9	Q86XW9	330 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	ZSWIM2	Q8NEG5	633 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	OR5AN1	Q8NGI8	311 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	SLC7A14	Q8TBB6	771 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	MAML3	Q96JK9	1138 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	GPHA2	Q96T91	129 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	IL23A	Q9NPF7	189 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	ACSS2	Q9NR19	701 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	GPRC5B	Q9NZH0	403 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	RCAN3	Q9UKA8	241 aa		6.17	□□□□□ -1.42
FARP1-238	ENST00000602015	SETD1A	O15047	1707 aa	Known RBP	6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	CEP350	Q5VT06	3117 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	TCRBV16S1A1N1	A0A5B0	115 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	UBE2QL1	A1L167	161 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015		B4E1Z4	1266 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	PRL	P01236	227 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	JUN	P05412	331 aa	Known RBP	6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	VSIG10L2	P0DP72	767 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	ZBTB48	P10074	688 aa	Predicted RBP	6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	STAT3	P40763	770 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	SLC6A3	Q01959	620 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	FKBP15	Q5T1M5	1219 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	SYNE4	Q8N205	404 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	IGSF22	Q8N9C0	903 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	PLA2G15	Q8NCC3	412 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	LENG9	Q96B70	501 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	WDR92	Q96MX6	357 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	SYNPO2	Q9UMS6	1093 aa		6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	NPHP4	O75161	1426 aa	Predicted RBP	6.16	□□□□□ -1.42
FARP1-238	ENST00000602015	CDK12	Q9NYV4	1490 aa	Predicted RBP	6.15	□□□□□ -1.42
FARP1-238	ENST00000602015	DEPDC5	O75140	1603 aa		6.15	□□□□□ -1.42
FARP1-238	ENST00000602015	RNF17	Q9BXT8	1623 aa	Known RBP	6.15	□□□□□ -1.42

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