RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 KLRC2P26717 231 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 AFF1P51825 1210 aaKnown RBP18.1■□□□□ 0.49
SSBP4-211ENST00000601614 PRKCEQ02156 737 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 SPECC1Q5M775 1068 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 APOA5Q6Q788 366 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 SLC44A3Q8N4M1 653 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 EXOC6Q8TAG9 804 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 FAM167AQ96KS9 214 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 CNTNAP3BQ96NU0 1288 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 TRAIPQ9BWF2 469 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 CNTNAP3Q9BZ76 1288 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 POTEMA6NI47 508 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 DDHD2O94830 711 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 SP9P0CG40 484 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 MYBP10242 640 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 TWF2Q6IBS0 349 aaKnown RBP18.09■□□□□ 0.49
SSBP4-211ENST00000601614 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 ZNF710Q8N1W2 664 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 LENG9Q96B70 501 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 LSG1Q9H089 658 aaKnown RBP18.09■□□□□ 0.49
SSBP4-211ENST00000601614 MAN1C1Q9NR34 630 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 CHST12Q9NRB3 414 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 FAM105AQ9NUU6 356 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 SAMM50Q9Y512 469 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 ACACBO00763 2458 aa18.09■□□□□ 0.49
SSBP4-211ENST00000601614 A0A087WZ62 844 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 TMEM150BA6NC51 233 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 EDIL3O43854 480 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 GLULP15104 373 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 GBP2P32456 591 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 RNASELQ05823 741 aaKnown RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 TBC1D8BQ0IIM8 1120 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 TARBP2Q15633 366 aaKnown RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 PRR16Q569H4 304 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 GLB1LQ6UWU2 654 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 SUMF1Q8NBK3 374 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 ST13P5Q8NFI4 369 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 CMASQ8NFW8 434 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 GPR152Q8TDT2 470 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 CEP89Q96ST8 783 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 HINFPQ9BQA5 517 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 FDXACB1Q9BRP7 624 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 EMILIN2Q9BXX0 1053 aa18.08■□□□□ 0.48
SSBP4-211ENST00000601614 WDR6Q9NNW5 1121 aaKnown RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 FAM217BQ9NTX9 383 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 RBM28Q9NW13 759 aaKnown RBP18.08■□□□□ 0.48
SSBP4-211ENST00000601614 CLUHO75153 1309 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 CCDC195A0A1B0GUA6 201 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 hCG_1984214I3L0E3 225 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 LRRN2O75325 713 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 RFPL2O75678 378 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 SRFP11831 508 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 SETQ01105 290 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-211ENST00000601614 RTN1Q16799 776 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 AGMOQ6ZNB7 445 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 MAML2Q8IZL2 1156 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-211ENST00000601614 ZNF713Q8N859 430 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-211ENST00000601614 RUBCNQ92622 972 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 TCEANC2Q96MN5 208 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 SH2D3AQ9BRG2 576 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 GCOM2Q9BZD3 368 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-211ENST00000601614 NRBP2Q9NSY0 501 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 EPS15L1Q9UBC2 864 aa18.07■□□□□ 0.48
SSBP4-211ENST00000601614 PIN4Q9Y237 131 aaKnown RBP18.07■□□□□ 0.48
SSBP4-211ENST00000601614 TDRD15B5MCY1 1934 aaKnown RBP18.06■□□□□ 0.48
SSBP4-211ENST00000601614 WDR64B1ANS9 1081 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 C2CD2LO14523 706 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 INPPL1O15357 1258 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 ZNF623O75123 536 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 CDC27P30260 824 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 NECTIN1Q15223 517 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 RSPO4Q2I0M5 234 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-211ENST00000601614 CREB3L3Q68CJ9 461 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 TAS1R1Q7RTX1 841 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 C1orf210Q8IVY1 113 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 RSPH1Q8WYR4 309 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 GJA10Q969M2 543 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 FOXQ1Q9C009 403 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 DISC1Q9NRI5 854 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 MARCH5Q9NX47 278 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 TCEAL9Q9UHQ7 104 aa18.06■□□□□ 0.48
SSBP4-211ENST00000601614 IGKV6-21A0A0C4DH24 114 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 CARNS1A5YM72 827 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 STBD1O95210 358 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 RFX1P22670 979 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 CIITAP33076 1130 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 PHLDB3Q6NSJ2 640 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 KSR1Q8IVT5 923 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 ZNF707Q96C28 371 aaPredicted RBP18.05■□□□□ 0.48
SSBP4-211ENST00000601614 GLT8D2Q9H1C3 349 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 ARHGEF3Q9NR81 526 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 MRPL17Q9NRX2 175 aaKnown RBP18.05■□□□□ 0.48
SSBP4-211ENST00000601614 SIT1Q9Y3P8 196 aa18.05■□□□□ 0.48
SSBP4-211ENST00000601614 MAP1BP46821 2468 aaKnown RBP18.04■□□□□ 0.48
SSBP4-211ENST00000601614 NRP1O14786 923 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 MSH4O15457 936 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 TEX28O15482 410 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 CHMP2AO43633 222 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 SFPQP23246 707 aaKnown RBP eCLIP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms