RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ERVFC1P60507 584 aa25.26■■□□□ 1.63
SSBP4-209ENST00000601357 ORC2Q13416 577 aaPredicted RBP25.26■■□□□ 1.63
SSBP4-209ENST00000601357 PDE12Q6L8Q7 609 aaKnown RBP25.26■■□□□ 1.63
SSBP4-209ENST00000601357 MRPS27Q92552 414 aaKnown RBP25.26■■□□□ 1.63
SSBP4-209ENST00000601357 KHSRPQ92945 711 aaKnown RBP eCLIP25.26■■□□□ 1.63
SSBP4-209ENST00000601357 MSLNLQ96KJ4 702 aa25.26■■□□□ 1.63
SSBP4-209ENST00000601357 SPATA31C1P0DKV0 1188 aa25.25■■□□□ 1.63
SSBP4-209ENST00000601357 ATP2B1P20020 1258 aa25.25■■□□□ 1.63
SSBP4-209ENST00000601357 HOXA11P31270 313 aaPredicted RBP25.25■■□□□ 1.63
SSBP4-209ENST00000601357 PPM1AP35813 382 aa25.25■■□□□ 1.63
SSBP4-209ENST00000601357 PBX3P40426 434 aa25.25■■□□□ 1.63
SSBP4-209ENST00000601357 RARRES1P49788 294 aa25.25■■□□□ 1.63
SSBP4-209ENST00000601357 RNF149Q8NC42 400 aa25.25■■□□□ 1.63
SSBP4-209ENST00000601357 MRPL9Q9BYD2 267 aaKnown RBP25.25■■□□□ 1.63
SSBP4-209ENST00000601357 CLEC1BQ9P126 229 aa25.25■■□□□ 1.63
SSBP4-209ENST00000601357 FAM50BQ9Y247 325 aa25.25■■□□□ 1.63
SSBP4-209ENST00000601357 DGAT1O75907 488 aa25.24■■□□□ 1.63
SSBP4-209ENST00000601357 GLP2RO95838 553 aa25.24■■□□□ 1.63
SSBP4-209ENST00000601357 XRCC6P12956 609 aaKnown RBP eCLIP25.24■■□□□ 1.63
SSBP4-209ENST00000601357 MXD4Q14582 209 aaPredicted RBP25.24■■□□□ 1.63
SSBP4-209ENST00000601357 NOSTRINQ8IVI9 506 aa25.24■■□□□ 1.63
SSBP4-209ENST00000601357 LPPQ93052 612 aa25.24■■□□□ 1.63
SSBP4-209ENST00000601357 SPG21Q9NZD8 308 aa25.24■■□□□ 1.63
SSBP4-209ENST00000601357 PRKAG3Q9UGI9 489 aa25.24■■□□□ 1.63
SSBP4-209ENST00000601357 MEIS3P2A8K0S8 358 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 MBTPS2O43462 519 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 POU5F1BQ06416 359 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 SMAD2Q15796 467 aaKnown RBP25.23■■□□□ 1.63
SSBP4-209ENST00000601357 RBM23Q86U06 439 aaKnown RBP25.23■■□□□ 1.63
SSBP4-209ENST00000601357 IFNLR1Q8IU57 520 aaPredicted RBP25.23■■□□□ 1.63
SSBP4-209ENST00000601357 GJD3Q8N144 294 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 SLC39A11Q8N1S5 342 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 FAM184AQ8NB25 1140 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 MICAL1Q8TDZ2 1067 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 PIGOQ8TEQ8 1089 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 TLE6Q9H808 572 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 TUFT1Q9NNX1 390 aa25.23■■□□□ 1.63
SSBP4-209ENST00000601357 EYA4O95677 639 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 ARL2P36404 184 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 NDUFV1P49821 464 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 PTENP60484 403 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 ZP2Q05996 745 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 SMAD4Q13485 552 aaKnown RBP25.22■■□□□ 1.63
SSBP4-209ENST00000601357 RABEP1Q15276 862 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 CLUL1Q15846 466 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 UBXN11Q5T124 520 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 MRPL10Q7Z7H8 261 aaKnown RBP25.22■■□□□ 1.63
SSBP4-209ENST00000601357 CATSPER3Q86XQ3 398 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 EPHX3Q9H6B9 360 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 PUF60Q9UHX1 559 aaKnown RBP25.22■■□□□ 1.63
SSBP4-209ENST00000601357 CD207Q9UJ71 328 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 PCDHB2Q9Y5E7 798 aa25.22■■□□□ 1.63
SSBP4-209ENST00000601357 OFD1O75665 1012 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 OR52Z1P0C646 297 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 U2AF2P26368 475 aaKnown RBP eCLIP25.21■■□□□ 1.63
SSBP4-209ENST00000601357 TRAPPC10P48553 1259 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 BCAR1P56945 870 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 KRT17Q04695 432 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 COASYQ13057 564 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 CAPSQ13938 189 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 PCBP1Q15365 356 aaKnown RBP eCLIP25.21■■□□□ 1.635e-7■■■□□ 17.8
SSBP4-209ENST00000601357 ZNF174Q15697 407 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 DUSP6Q16828 381 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 LONRF3Q496Y0 759 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 TTC38Q5R3I4 469 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 GLB1LQ6UWU2 654 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 ASAP3Q8TDY4 903 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 CDCA3Q99618 268 aaPredicted RBP25.21■■□□□ 1.63
SSBP4-209ENST00000601357 POLR3CQ9BUI4 534 aaPredicted RBP25.21■■□□□ 1.63
SSBP4-209ENST00000601357 C1QTNF1Q9BXJ1 281 aa25.21■■□□□ 1.63
SSBP4-209ENST00000601357 A0A087WWV3 80 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 FSD2A1L4K1 749 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 C19orf67A6NJJ6 358 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 PER2O15055 1255 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 MED24O75448 989 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 TECP42680 631 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 KCNC3Q14003 757 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 NOMO2Q5JPE7 1267 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 AGMOQ6ZNB7 445 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 ADHFE1Q8IWW8 467 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 C4orf32Q8N8J7 132 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 SMRP1Q8NCR6 262 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 VN1R2Q8NFZ6 395 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 PGBD4Q96DM1 585 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 TCF25Q9BQ70 676 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 NFKBIZQ9BYH8 718 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 NGRNQ9NPE2 291 aaKnown RBP25.2■■□□□ 1.62
SSBP4-209ENST00000601357 TBC1D13Q9NVG8 400 aa25.2■■□□□ 1.62
SSBP4-209ENST00000601357 DBR1Q9UK59 544 aaKnown RBP25.2■■□□□ 1.62
SSBP4-209ENST00000601357 PI4K2BG5E9Z4 385 aa25.19■■□□□ 1.62
SSBP4-209ENST00000601357 TSPAN1O60635 241 aa25.19■■□□□ 1.62
SSBP4-209ENST00000601357 GLRA2P23416 452 aa25.19■■□□□ 1.62
SSBP4-209ENST00000601357 ALDH7A1P49419 539 aaKnown RBP25.19■■□□□ 1.62
SSBP4-209ENST00000601357 TFDP1Q14186 410 aa25.19■■□□□ 1.62
SSBP4-209ENST00000601357 PLPP4Q5VZY2 271 aa25.19■■□□□ 1.62
SSBP4-209ENST00000601357 BARX2Q9UMQ3 279 aaPredicted RBP25.19■■□□□ 1.62
SSBP4-209ENST00000601357 HIDE1A8MVS5 230 aa25.18■■□□□ 1.62
SSBP4-209ENST00000601357 ERLIN2O94905 339 aa25.18■■□□□ 1.62
SSBP4-209ENST00000601357 RPA1P27694 616 aa25.18■■□□□ 1.62
SSBP4-209ENST00000601357 AXLP30530 894 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms