RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RAB27AP51159 221 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 RAD51AP2Q09MP3 1159 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 MCM6Q14566 821 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 NOTUMQ6P988 496 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 USP49Q70CQ1 688 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 KCNK18Q7Z418 384 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
SRRM1-223ENST00000600523 NPAS4Q8IUM7 802 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 HACE1Q8IYU2 909 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 PDILTQ8N807 584 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 SLC17A8Q8NDX2 589 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 RUSC1Q9BVN2 902 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 PBX4Q9BYU1 374 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 PANK2Q9BZ23 570 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 OSBPL7Q9BZF2 842 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 TMX1Q9H3N1 280 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 ZHX3Q9H4I2 956 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 MAGEF1Q9HAY2 307 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 KMT5AQ9NQR1 393 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 CHMP5Q9NZZ3 219 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 TRIOBPQ9H2D6 2365 aa14.37□□□□□ -0.11
SRRM1-223ENST00000600523 GRXCR1A8MXD5 290 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 K7ERI5 159 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 FGFR4P22455 802 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 FXR1P51114 621 aaKnown RBP eCLIP14.36□□□□□ -0.11
SRRM1-223ENST00000600523 RABGGTBP53611 331 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 PEX3P56589 373 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 TCTN1Q2MV58 587 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 PPP2R2DQ66LE6 453 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 ADALQ6DHV7 355 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 CEP57L1Q8IYX8 460 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 ABI1Q8IZP0 508 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 CCDC51Q96ER9 411 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 TRIM6Q9C030 488 aaPredicted RBP14.36□□□□□ -0.11
SRRM1-223ENST00000600523 ELAC1Q9H777 363 aaKnown RBP14.36□□□□□ -0.11
SRRM1-223ENST00000600523 PARVGQ9HBI0 331 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 AGPAT5Q9NUQ2 364 aa14.36□□□□□ -0.11
SRRM1-223ENST00000600523 TET1Q8NFU7 2136 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 PLS3P13797 630 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 LIG1P18858 919 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 CMA1P23946 247 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 MBTD1Q05BQ5 628 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 STRN3Q13033 797 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 PRPF4BQ13523 1007 aaKnown RBP14.35□□□□□ -0.11
SRRM1-223ENST00000600523 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
SRRM1-223ENST00000600523 RESP18Q5W5W9 173 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 CDCA2Q69YH5 1023 aaPredicted RBP14.35□□□□□ -0.11
SRRM1-223ENST00000600523 FAM109BQ6ICB4 259 aaPredicted RBP14.35□□□□□ -0.11
SRRM1-223ENST00000600523 SHC4Q6S5L8 630 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 MYCT1Q8N699 235 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 RNF169Q8NCN4 708 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 CNNM3Q8NE01 707 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 SPIRE2Q8WWL2 714 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 RSPH1Q8WYR4 309 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 DHX58Q96C10 678 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 PGBD4Q96DM1 585 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 LRCH3Q96II8 777 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 REEP2Q9BRK0 252 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 ADPGKQ9BRR6 497 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 TNMDQ9H2S6 317 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 BLOC1S4Q9NUP1 217 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 TMEM161AQ9NX61 479 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 USP25Q9UHP3 1055 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 KCNH3Q9ULD8 1083 aa14.35□□□□□ -0.11
SRRM1-223ENST00000600523 SIP14410 1827 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 A0A0U1RQF3 1178 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 C9IYK1 514 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 SOX1O00570 391 aaPredicted RBP14.34□□□□□ -0.11
SRRM1-223ENST00000600523 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
SRRM1-223ENST00000600523 EOMESO95936 686 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 CA3P07451 260 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 NPTX2P47972 431 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 BTG3Q14201 252 aaPredicted RBP14.34□□□□□ -0.11
SRRM1-223ENST00000600523 DSC3Q14574 896 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 FIBCD1Q8N539 461 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 TRAIPQ9BWF2 469 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 NKX2-4Q9H2Z4 354 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 MINDY3Q9H8M7 445 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 MICAL3Q7RTP6 2002 aa14.34□□□□□ -0.11
SRRM1-223ENST00000600523 SFI1A8K8P3 1242 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 N4BP3O15049 544 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 MGEA5O60502 916 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 TSPAN1O60635 241 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 PRKCBP05771 671 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 GAP43P17677 238 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 PBX2P40425 430 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 HTRA4P83105 476 aaPredicted RBP14.33□□□□□ -0.12
SRRM1-223ENST00000600523 FAM187BQ17R55 369 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
SRRM1-223ENST00000600523 RTN4RL1Q86UN2 441 aaPredicted RBP14.33□□□□□ -0.12
SRRM1-223ENST00000600523 FAM178BQ8IXR5 827 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 LINC01599Q8WXQ3 324 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 BSNDQ8WZ55 320 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 SAMD11Q96NU1 681 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 NTPCRQ9BSD7 190 aaKnown RBP14.33□□□□□ -0.12
SRRM1-223ENST00000600523 ZNF576Q9H609 170 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 TMEM134Q9H6X4 195 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 POLD4Q9HCU8 107 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms