RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CELF4Q9BZC1 486 aaKnown RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 RGS17Q9UGC6 210 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 GOLGA6CA6NDK9 693 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 SLC16A3O15427 465 aaKnown RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 ZEB2O60315 1214 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 HSF2BPO75031 334 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 KIF4AO95239 1232 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 LCA5LO95447 670 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 CCNE2O96020 404 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 KRT14P02533 472 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 TUBBP07437 444 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 GOLGA6DP0CG33 693 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 MXI1P50539 228 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 MESDQ14696 234 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 SLC35G2Q8TBE7 412 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 SYN2Q92777 582 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 ARHGEF26Q96DR7 871 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 RIT2Q99578 217 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 PDCD2LQ9BRP1 358 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 KMT5AQ9NQR1 393 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 GOLGA6AQ9NYA3 693 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 APEX2Q9UBZ4 518 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 AMACRQ9UHK6 382 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 PPP1R9AQ9ULJ8 1098 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 COL4A5P29400 1685 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 RBAK-RBAKDNI3L0D1 243 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 BUB1BO60566 1050 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 NR3C2P08235 984 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 GJC1P36383 396 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 MAPK7Q13164 816 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 AADACL2Q6P093 401 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 METTL13Q8N6R0 699 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 XXYLT1Q8NBI6 393 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 BTBD6Q96KE9 485 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 SLC38A10Q9HBR0 1119 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 IGSF9BQ9UPX0 1349 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 ARFGEF1Q9Y6D6 1849 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 PHF20L1A8MW92 1017 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 NFKBIEO00221 500 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 EIF3DO15371 548 aaKnown RBP eCLIP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 TNNC1P63316 161 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 IFI16Q16666 785 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 SEZ6Q53EL9 994 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 MEI1Q5TIA1 1274 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 ZNF662Q6ZS27 426 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 IFT20Q8IY31 132 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 FAM71BQ8TC56 605 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 DHX38Q92620 1227 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 FIZ1Q96SL8 496 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 ODF2LQ9ULJ1 636 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 BZW2Q9Y6E2 419 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 CYP26A1O43174 497 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 FGGP02679 453 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 HPDP32754 393 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 SSR1P43307 286 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 LIG3P49916 1009 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 SMTNP53814 917 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 DMP1Q13316 513 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 ZFYVE27Q5T4F4 411 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 CFAP58Q5T655 872 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 TPCN2Q8NHX9 752 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 SLC30A5Q8TAD4 765 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 GGA3Q9NZ52 723 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 AMFRQ9UKV5 643 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 SIPA1L1O43166 1804 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 WDR64B1ANS9 1081 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 VWA5AO00534 786 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 DHX15O43143 795 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 BIRC3Q13489 604 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 MMGT1Q8N4V1 131 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 UHMK1Q8TAS1 419 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 GOLGA5Q8TBA6 731 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 TMEM143Q96AN5 459 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 FAM213AQ9BRX8 229 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 ANKFY1Q9P2R3 1169 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 TSKSQ9UJT2 592 aa12.49□□□□□ -0.41
ARHGEF1-220ENST00000600274 FTLP02792 175 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 BCRP11274 1271 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 PLS3P13797 630 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 HSD17B4P51659 736 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 BMT2Q1RMZ1 405 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 TTC31Q49AM3 519 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 ANKRD35Q8N283 1001 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 OR2W6PQ8NHA6 318 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 STK33Q9BYT3 514 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 SEL1LQ9UBV2 794 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 FOCADQ5VW36 1801 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 TARSL2A2RTX5 802 aaKnown RBP12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 LRRIQ4A6NIV6 560 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 SYF2O95926 243 aaKnown RBP12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 TTLL12Q14166 644 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 UBLCP1Q8WVY7 318 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms