RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 ACCSQ96QU6 501 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 FAM184BQ9ULE4 1060 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 A6NJR5 290 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 LGALS16A8MUM7 142 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 H3BRB1 525 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 H2AFXP16104 143 aaPredicted RBP16.62■□□□□ 0.25
VRK3-218ENST00000600031 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
VRK3-218ENST00000600031 KIF22Q14807 665 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 SPECC1LQ69YQ0 1117 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 ZBTB10Q96DT7 871 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 BAG1Q99933 345 aaPredicted RBP16.62■□□□□ 0.25
VRK3-218ENST00000600031 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
VRK3-218ENST00000600031 TUT1Q9H6E5 874 aaKnown RBP16.62■□□□□ 0.25
VRK3-218ENST00000600031 TMEM206Q9H813 350 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 SUGCTQ9HAC7 445 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 AGPAT3Q9NRZ7 376 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 TBX20Q9UMR3 447 aa16.62■□□□□ 0.25
VRK3-218ENST00000600031 IGKV6-21A0A0C4DH24 114 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 DENND3A2RUS2 1198 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 INSRRP14616 1297 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 UBXN1Q04323 297 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 HS2ST1Q7LGA3 356 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 CD99L2Q8TCZ2 262 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 TISP43B9A030 160 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 PES1O00541 588 aaKnown RBP16.61■□□□□ 0.25
VRK3-218ENST00000600031 AKAP3O75969 853 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 GNA14O95837 355 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 TPM1P09493 284 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 RPL13P26373 211 aaKnown RBP16.61■□□□□ 0.25
VRK3-218ENST00000600031 CASP4P49662 377 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 TRIM32Q13049 653 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 NFIL3Q16649 462 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 ERCC6LQ2NKX8 1250 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 CCDC40Q4G0X9 1142 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 MFSD14CQ5VZR4 134 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 LRRC71Q8N4P6 559 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 ARHGAP28Q9P2N2 729 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 PPP2R2CQ9Y2T4 447 aa16.61■□□□□ 0.25
VRK3-218ENST00000600031 CYBAP13498 195 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 MARSP56192 900 aaKnown RBP16.6■□□□□ 0.25
VRK3-218ENST00000600031 IGBP1P78318 339 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 BMS1Q14692 1282 aaKnown RBP16.6■□□□□ 0.25
VRK3-218ENST00000600031 MAN2A1Q16706 1144 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 TAS1R3Q7RTX0 852 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 PRPF31Q8WWY3 499 aaKnown RBP16.6■□□□□ 0.25
VRK3-218ENST00000600031 DMAC2Q9NW81 257 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 AKR1A1P14550 325 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 NAMPTP43490 491 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 VWA3BQ502W6 1294 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 ZNF484Q5JVG2 852 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 IER5Q5VY09 327 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 MAP4K3Q8IVH8 894 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 GOLGA5Q8TBA6 731 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 Q9Y3F1 56 aa16.6■□□□□ 0.25
VRK3-218ENST00000600031 LRRIQ4A6NIV6 560 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 GPR25O00155 361 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 GAS2O43903 313 aaKnown RBP16.59■□□□□ 0.25
VRK3-218ENST00000600031 C22orf31O95567 290 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 DNM2P50570 870 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 CYP2J2P51589 502 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 CAPSQ13938 189 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 TRIM59Q8IWR1 403 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 EXOC8Q8IYI6 725 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 TC2NQ8N9U0 490 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 MNS1Q8NEH6 495 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 UBXN4Q92575 508 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 NDST4Q9H3R1 872 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 ARGLU1Q9NWB6 273 aaPredicted RBP16.59■□□□□ 0.25
VRK3-218ENST00000600031 KCNG1Q9UIX4 513 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 CASP8AP2Q9UKL3 1982 aa16.59■□□□□ 0.25
VRK3-218ENST00000600031 EVPLQ92817 2033 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 URI1O94763 535 aaPredicted RBP16.58■□□□□ 0.25
VRK3-218ENST00000600031 BEX3Q00994 111 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 GOLGA8FQ08AF8 430 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 GOLGA8DPQ0D2H9 430 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 PPP2R5AQ15172 486 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 EFCAB12Q6NXP0 572 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 DEPTORQ8TB45 409 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 TCP11Q8WWU5 503 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 SRRDQ9UH36 339 aa16.58■□□□□ 0.25
VRK3-218ENST00000600031 EFCAB8A8MWE9 144 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 ANKRD63C9JTQ0 380 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 ELNP15502 786 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 KLRC1P26715 233 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 CLCN3P51790 818 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 FAM193AP78312 1265 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 CACNB2Q08289 660 aaPredicted RBP16.58■□□□□ 0.24
VRK3-218ENST00000600031 FRMD5Q7Z6J6 570 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 SLC9A9Q8IVB4 645 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 METTL13Q8N6R0 699 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 PSPC1Q8WXF1 523 aaKnown RBP16.58■□□□□ 0.24
VRK3-218ENST00000600031 KAT2BQ92831 832 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 JPH2Q9BR39 696 aaPredicted RBP16.58■□□□□ 0.24
VRK3-218ENST00000600031 CBWD1Q9BRT8 395 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 SUCLA2Q9P2R7 463 aaPredicted RBP16.58■□□□□ 0.24
VRK3-218ENST00000600031 EXOC7Q9UPT5 735 aa16.58■□□□□ 0.24
VRK3-218ENST00000600031 ITIH6Q6UXX5 1313 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms