RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 PCDHB7Q9Y5E2 793 aa13.39□□□□□ -0.27
ZNF548-209ENST00000598895 ADGRA3Q8IWK6 1321 aa13.39□□□□□ -0.27
ZNF548-209ENST00000598895 C9IYK1 514 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 DGKIO75912 1065 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
ZNF548-209ENST00000598895 STAG3L1P0CL83 205 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 FGFR1P11362 822 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 GLRA2P23416 452 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 ARL2P36404 184 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 PHKA2P46019 1235 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 BTG3Q14201 252 aaPredicted RBP13.38□□□□□ -0.27
ZNF548-209ENST00000598895 SPECC1Q5M775 1068 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 CCDC183Q5T5S1 534 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 ARL6IP4Q66PJ3 421 aaKnown RBP13.38□□□□□ -0.27
ZNF548-209ENST00000598895 CABP7Q86V35 215 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 FIBCD1Q8N539 461 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
ZNF548-209ENST00000598895 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 TGS1Q96RS0 853 aaKnown RBP13.38□□□□□ -0.27
ZNF548-209ENST00000598895 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
ZNF548-209ENST00000598895 C1orf112Q9NSG2 853 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 TTC3P53804 2025 aa13.38□□□□□ -0.27
ZNF548-209ENST00000598895 LRRIQ4A6NIV6 560 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 ASAP2O43150 1006 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 BMP15O95972 392 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 ZSCAN22P10073 491 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 LIG1P18858 919 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 MUTP22033 750 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 GRB10Q13322 594 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 TFDP1Q14186 410 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 MXD4Q14582 209 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 PTPAQ15257 358 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 CCDC85BQ15834 202 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 CRIPAKQ8N1N5 446 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 MCPH1Q8NEM0 835 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 RASSF8Q8NHQ8 419 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 MAFAQ8NHW3 353 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 BSNDQ8WZ55 320 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 ZNF689Q96CS4 500 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 ZSCAN16Q9H4T2 348 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 RC3H2Q9HBD1 1191 aaKnown RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 TFIP11Q9UBB9 837 aaKnown RBP13.37□□□□□ -0.27
ZNF548-209ENST00000598895 DNM3Q9UQ16 869 aa13.37□□□□□ -0.27
ZNF548-209ENST00000598895 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 FNDC1Q4ZHG4 1894 aaPredicted RBP13.36□□□□□ -0.27
ZNF548-209ENST00000598895 TBKBP1A7MCY6 615 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 ERLIN2O94905 339 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 CSPG5O95196 566 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 EYA4O95677 639 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 CYP11B2P19099 503 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 CTNNB1P35222 781 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 UBA7P41226 1012 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 ERVK-21P61565 698 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 UBE2HP62256 183 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 DHX8Q14562 1220 aaKnown RBP13.36□□□□□ -0.27
ZNF548-209ENST00000598895 SRGAP1Q7Z6B7 1085 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 ECHDC2Q86YB7 292 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 FBXO22Q8NEZ5 403 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 CPB2Q96IY4 423 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 CLIC6Q96NY7 704 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 RUSC1Q9BVN2 902 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 CSRNP2Q9H175 543 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 TMEM161AQ9NX61 479 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
ZNF548-209ENST00000598895 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
ZNF548-209ENST00000598895 MRPL42Q9Y6G3 142 aaKnown RBP13.36□□□□□ -0.27
ZNF548-209ENST00000598895 B4GALT5O43286 388 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 TSPAN1O60635 241 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 F13A1P00488 732 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 PTMAP06454 111 aaKnown RBP13.35□□□□□ -0.27
ZNF548-209ENST00000598895 LONP1P36776 959 aaKnown RBP13.35□□□□□ -0.27
ZNF548-209ENST00000598895 PTENP60484 403 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 MBTD1Q05BQ5 628 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 KARSQ15046 597 aaKnown RBP13.35□□□□□ -0.27
ZNF548-209ENST00000598895 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 SPOUT1Q5T280 376 aaKnown RBP13.35□□□□□ -0.27
ZNF548-209ENST00000598895 USP49Q70CQ1 688 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 CDR2LQ86X02 465 aaPredicted RBP13.35□□□□□ -0.27
ZNF548-209ENST00000598895 TMEM192Q8IY95 271 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
ZNF548-209ENST00000598895 LPPQ93052 612 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 CALML4Q96GE6 196 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 AK8Q96MA6 479 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 KIFC3Q9BVG8 833 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 AGPAT5Q9NUQ2 364 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 DACT1Q9NYF0 836 aa13.35□□□□□ -0.27
ZNF548-209ENST00000598895 NPHP3-ACAD11A0A0J9YXS1 232 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 MEIS3P2A8K0S8 358 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 HIP1RO75146 1068 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 ATF7P17544 494 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-209ENST00000598895 FAM189BP81408 668 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-209ENST00000598895 STK38Q15208 465 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 TMEM119Q4V9L6 283 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms