RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 MRPS27Q92552 414 aaKnown RBP25.65■■□□□ 1.7
SSBP4-205ENST00000598159 BMP2KQ9NSY1 1161 aaPredicted RBP25.65■■□□□ 1.7
SSBP4-205ENST00000598159 AGPAT5Q9NUQ2 364 aa25.65■■□□□ 1.7
SSBP4-205ENST00000598159 PPM1AP35813 382 aa25.64■■□□□ 1.7
SSBP4-205ENST00000598159 PCBP1Q15365 356 aaKnown RBP eCLIP25.64■■□□□ 1.75e-7■■■□□ 17.8
SSBP4-205ENST00000598159 ZNF174Q15697 407 aa25.64■■□□□ 1.7
SSBP4-205ENST00000598159 ADGRD2Q7Z7M1 963 aa25.64■■□□□ 1.7
SSBP4-205ENST00000598159 PGBD4Q96DM1 585 aa25.64■■□□□ 1.7
SSBP4-205ENST00000598159 SPG21Q9NZD8 308 aa25.64■■□□□ 1.7
SSBP4-205ENST00000598159 CARNS1A5YM72 827 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 NRIP1P48552 1158 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 TRAPPC10P48553 1259 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 ERVFC1P60507 584 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 DLX2Q07687 328 aaPredicted RBP25.63■■□□□ 1.69
SSBP4-205ENST00000598159 TFDP1Q14186 410 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 RBM23Q86U06 439 aaKnown RBP25.63■■□□□ 1.69
SSBP4-205ENST00000598159 NOSTRINQ8IVI9 506 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 CCDC43Q96MW1 224 aaKnown RBP25.63■■□□□ 1.69
SSBP4-205ENST00000598159 TLE6Q9H808 572 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 MINDY3Q9H8M7 445 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 TUFT1Q9NNX1 390 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 XPNPEP1Q9NQW7 623 aa25.63■■□□□ 1.69
SSBP4-205ENST00000598159 FSD2A1L4K1 749 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 POTEMA6NI47 508 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 FSCN2O14926 492 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 LINC01565O15544 149 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 ST18O60284 1047 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 SPATA31C1P0DKV0 1188 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 TECP42680 631 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 ALDH7A1P49419 539 aaKnown RBP25.62■■□□□ 1.69
SSBP4-205ENST00000598159 RARRES1P49788 294 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 GJD3Q8N144 294 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 CDCA3Q99618 268 aaPredicted RBP25.62■■□□□ 1.69
SSBP4-205ENST00000598159 UPF2Q9HAU5 1272 aaKnown RBP25.62■■□□□ 1.69
SSBP4-205ENST00000598159 PRKAG3Q9UGI9 489 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 NOL7Q9UMY1 257 aaKnown RBP25.62■■□□□ 1.69
SSBP4-205ENST00000598159 ARID2Q68CP9 1835 aa25.62■■□□□ 1.69
SSBP4-205ENST00000598159 OR52Z1P0C646 297 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 AXLP30530 894 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 ARL2P36404 184 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 NDUFV1P49821 464 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 PTENP60484 403 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 NCBP1Q09161 790 aaKnown RBP25.61■■□□□ 1.69
SSBP4-205ENST00000598159 TTC38Q5R3I4 469 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 GLB1LQ6UWU2 654 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 CATSPER3Q86XQ3 398 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 ERMNQ8TAM6 284 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 PIGOQ8TEQ8 1089 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 POLR3CQ9BUI4 534 aaPredicted RBP25.61■■□□□ 1.69
SSBP4-205ENST00000598159 C1QTNF1Q9BXJ1 281 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 NGRNQ9NPE2 291 aaKnown RBP25.61■■□□□ 1.69
SSBP4-205ENST00000598159 CD207Q9UJ71 328 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 PCDHB2Q9Y5E7 798 aa25.61■■□□□ 1.69
SSBP4-205ENST00000598159 TBX10O75333 385 aa25.6■■□□□ 1.69
SSBP4-205ENST00000598159 OFD1O75665 1012 aa25.6■■□□□ 1.69
SSBP4-205ENST00000598159 U2AF2P26368 475 aaKnown RBP eCLIP25.6■■□□□ 1.69
SSBP4-205ENST00000598159 HOXA11P31270 313 aaPredicted RBP25.6■■□□□ 1.69
SSBP4-205ENST00000598159 MRPL10Q7Z7H8 261 aaKnown RBP25.6■■□□□ 1.69
SSBP4-205ENST00000598159 IFNLR1Q8IU57 520 aaPredicted RBP25.6■■□□□ 1.69
SSBP4-205ENST00000598159 LPPQ93052 612 aa25.6■■□□□ 1.69
SSBP4-205ENST00000598159 NACC1Q96RE7 527 aa25.6■■□□□ 1.69
SSBP4-205ENST00000598159 CD320Q9NPF0 282 aa25.6■■□□□ 1.69
SSBP4-205ENST00000598159 DBR1Q9UK59 544 aaKnown RBP25.6■■□□□ 1.69
SSBP4-205ENST00000598159 KIF3AQ9Y496 699 aa25.6■■□□□ 1.69
SSBP4-205ENST00000598159 PCDHGC5Q9Y5F6 944 aa25.6■■□□□ 1.69
SSBP4-205ENST00000598159 MBTPS2O43462 519 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 ERLIN2O94905 339 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 RPA1P27694 616 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 BCAR1P56945 870 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 SMAD2Q15796 467 aaKnown RBP25.59■■□□□ 1.69
SSBP4-205ENST00000598159 LONRF3Q496Y0 759 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 NOMO2Q5JPE7 1267 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 SLC39A11Q8N1S5 342 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 CNNM3Q8NE01 707 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 MSLNLQ96KJ4 702 aa25.59■■□□□ 1.69
SSBP4-205ENST00000598159 A0A087WWV3 80 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 PER2O15055 1255 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 EYA4O95677 639 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 MUTP22033 750 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 SSTR3P32745 418 aaPredicted RBP25.58■■□□□ 1.69
SSBP4-205ENST00000598159 PBX3P40426 434 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 SMAD4Q13485 552 aaKnown RBP25.58■■□□□ 1.69
SSBP4-205ENST00000598159 CLUL1Q15846 466 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 DUSP6Q16828 381 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 TCF25Q9BQ70 676 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 NFKBIZQ9BYH8 718 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 CLEC1BQ9P126 229 aa25.58■■□□□ 1.69
SSBP4-205ENST00000598159 MED24O75448 989 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 COASYQ13057 564 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 BMS1Q14692 1282 aaKnown RBP25.57■■□□□ 1.68
SSBP4-205ENST00000598159 UBXN11Q5T124 520 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 AGMOQ6ZNB7 445 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 TMC7Q7Z402 723 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 ADHFE1Q8IWW8 467 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 C4orf32Q8N8J7 132 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 ASAP3Q8TDY4 903 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 EPHX3Q9H6B9 360 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 UBN1Q9NPG3 1134 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 ENTPD7Q9NQZ7 604 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 TBC1D13Q9NVG8 400 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms