RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TM6SF1Q9BZW5 370 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 GBP3Q9H0R5 595 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 ZBP1Q9H171 429 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 POMKQ9H5K3 350 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 IFT122Q9HBG6 1241 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 CYP26B1Q9NR63 512 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 TBC1D13Q9NVG8 400 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 DNAJB4Q9UDY4 337 aa13.57□□□□□ -0.24
SOX2-OT-228ENST00000597828 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 FSD2A1L4K1 749 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 CTDNEP1O95476 244 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 SRGAP2BP0DMP2 458 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 MRE11P49959 708 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 AFF1P51825 1210 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 PPP2R5CQ13362 524 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 CPLX2Q6PUV4 134 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 CATSPER4Q7RTX7 472 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 NEK8Q86SG6 692 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 ZNF410Q86VK4 478 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 VPS52Q8N1B4 723 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 C12orf76Q8N812 135 aaPredicted RBP13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 MRPL43Q8N983 215 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 HAS1Q92839 578 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 TMEM143Q96AN5 459 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 TMEM169Q96HH4 297 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 MFSD14AQ96MC6 490 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 VN1R3Q9BXE9 311 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 SLKQ9H2G2 1235 aaPredicted RBP13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 SMOC2Q9H3U7 446 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 MINDY3Q9H8M7 445 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 AGPAT5Q9NUQ2 364 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 RGL1Q9NZL6 768 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 COL4A3BPQ9Y5P4 624 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 STK36Q9NRP7 1315 aa13.56□□□□□ -0.24
SOX2-OT-228ENST00000597828 USP34Q70CQ2 3546 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 PIEZO1Q92508 2521 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 ZBTB39O15060 712 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 EPB41L2O43491 1005 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 CCNT1O60563 726 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 LARGE1O95461 756 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 PDGFBP01127 241 aaPredicted RBP13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 EPCAMP16422 314 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 QARSP47897 775 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 SLC11A1P49279 550 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 ALDH7A1P49419 539 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 DNM2P50570 870 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 VCPP55072 806 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 PTPN21Q16825 1174 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 RARS2Q5T160 578 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 NCAPH2Q6IBW4 605 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 GALNT17Q6IS24 598 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 BMP8AQ7Z5Y6 402 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 CASP10Q92851 521 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 ASIC4Q96FT7 647 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 LXNQ9BS40 222 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 TRAIPQ9BWF2 469 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 CHST12Q9NRB3 414 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 ANK1P16157 1881 aa13.55□□□□□ -0.24
SOX2-OT-228ENST00000597828 C2CD4DB7Z1M9 353 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 OFD1O75665 1012 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 DDHD2O94830 711 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 CXCL14O95715 111 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 GALTP07902 379 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 FOSBP53539 338 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 POLGP54098 1239 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 SIGLEC14Q08ET2 396 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 NR5A1Q13285 461 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 CTTNQ14247 550 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 GLB1LQ6UWU2 654 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 AGMOQ6ZNB7 445 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 ZNF280BQ86YH2 543 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 IGSF21Q96ID5 467 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 CEP170P1Q96L14 293 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 KCNH6Q9H252 994 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 DHX33Q9H6R0 707 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 PCDHB2Q9Y5E7 798 aa13.54□□□□□ -0.24
SOX2-OT-228ENST00000597828 NOTCH4Q99466 2003 aa13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 WNT7AO00755 349 aa13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 PFKFB2O60825 505 aa13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 SSBP05455 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 SRGAP2CP0DJJ0 459 aa13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 CTSAP10619 480 aa13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 HOXB8P17481 243 aaPredicted RBP13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 YWHABP31946 246 aaKnown RBP13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 RAB27AP51159 221 aa13.53□□□□□ -0.24
SOX2-OT-228ENST00000597828 AK2P54819 239 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms