RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 GPT2Q8TD30 523 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 NOC3LQ8WTT2 800 aaKnown RBP10.26□□□□□ -0.77
ZNF548-206ENST00000597047 TMEM40Q8WWA1 233 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 SEPT8Q92599 483 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 BICD1Q96G01 975 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 CPB2Q96IY4 423 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
ZNF548-206ENST00000597047 AGO3Q9H9G7 860 aaKnown RBP10.26□□□□□ -0.77
ZNF548-206ENST00000597047 SLC39A2Q9NP94 309 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 PADI3Q9ULW8 664 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 ST3GAL5Q9UNP4 418 aa10.26□□□□□ -0.77
ZNF548-206ENST00000597047 DENND3A2RUS2 1198 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 GPR182O15218 404 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 CAND2O75155 1236 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 SMC2O95347 1197 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 FGBP02675 491 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 PRKCBP05771 671 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 MYBP10242 640 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 HARSP12081 509 aaKnown RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 DARSP14868 501 aaKnown RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 ZSCAN20P17040 1043 aaPredicted RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 GAP43P17677 238 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 SFPQP23246 707 aaKnown RBP eCLIP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 EIF4BP23588 611 aaKnown RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 MAGEA10P43363 369 aaPredicted RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 PTENP60484 403 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 STRN3Q13033 797 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 MBTPS1Q14703 1052 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 KMT5BQ4FZB7 885 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 ZC2HC1CQ53FD0 456 aaPredicted RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 FAM26DQ5JW98 314 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 PRPF38BQ5VTL8 546 aaKnown RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 FAM117BQ6P1L5 589 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 TRAF7Q6Q0C0 670 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 TSHZ1Q6ZSZ6 1077 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 UNC13DQ70J99 1090 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 ZNF365Q70YC5 407 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 HAUS6Q7Z4H7 955 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 SRGAP1Q7Z6B7 1085 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 RPAINQ86UA6 219 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 ZNF410Q86VK4 478 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 FAM228AQ86W67 206 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 SYCP3Q8IZU3 236 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 RNF169Q8NCN4 708 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 TCHPQ9BT92 498 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 UBE2OQ9C0C9 1292 aaKnown RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 NUP62CLQ9H1M0 184 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 C2orf40Q9H1Z8 148 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 MINDY3Q9H8M7 445 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 IL23AQ9NPF7 189 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 MAPK8IP1Q9UQF2 711 aa10.25□□□□□ -0.77
ZNF548-206ENST00000597047 PIN4Q9Y237 131 aaKnown RBP10.25□□□□□ -0.77
ZNF548-206ENST00000597047 B4GALT5O43286 388 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 PRPF6O94906 941 aaKnown RBP10.24□□□□□ -0.77
ZNF548-206ENST00000597047 UPP2O95045 317 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 MBD3O95983 291 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 ACTN1P12814 892 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 RFC2P35250 354 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 EPHB4P54760 987 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 DPYDQ12882 1025 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 PRPF4BQ13523 1007 aaKnown RBP10.24□□□□□ -0.77
ZNF548-206ENST00000597047 MAPK6Q16659 721 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 TCTN1Q2MV58 587 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 TWF2Q6IBS0 349 aaKnown RBP10.24□□□□□ -0.77
ZNF548-206ENST00000597047 ZBTB33Q86T24 672 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 NELFCDQ8IXH7 590 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 TIGD1Q96MW7 591 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 APOL6Q9BWW8 343 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 IFT122Q9HBG6 1241 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 KCNG1Q9UIX4 513 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 PCDHA5Q9Y5H7 936 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 MKI67P46013 3256 aaKnown RBP10.24□□□□□ -0.77
ZNF548-206ENST00000597047 ADGRA3Q8IWK6 1321 aa10.24□□□□□ -0.77
ZNF548-206ENST00000597047 SIP14410 1827 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 PARNO95453 639 aaKnown RBP10.23□□□□□ -0.77
ZNF548-206ENST00000597047 EFNA5P52803 228 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 MBTD1Q05BQ5 628 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 RBL2Q08999 1139 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 IKBKEQ14164 716 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 GPNMBQ14956 572 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 FAM26FQ5R3K3 315 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 CAVIN1Q6NZI2 390 aaKnown RBP10.23□□□□□ -0.77
ZNF548-206ENST00000597047 CNKSR3Q6P9H4 555 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 SMYD4Q8IYR2 804 aaPredicted RBP10.23□□□□□ -0.77
ZNF548-206ENST00000597047 GLIS3Q8NEA6 775 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 ADAM2Q99965 735 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.771e-8■□□□□ 10.6
ZNF548-206ENST00000597047 TARS2Q9BW92 718 aaKnown RBP10.23□□□□□ -0.77
ZNF548-206ENST00000597047 FGFBP2Q9BYJ0 223 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 IKZF4Q9H2S9 585 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 CLSTN2Q9H4D0 955 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 C17orf75Q9HAS0 396 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 ERVK-5Q9HDB9 667 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 PRMT7Q9NVM4 692 aaPredicted RBP10.23□□□□□ -0.77
ZNF548-206ENST00000597047 GDAQ9Y2T3 454 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 TANC1Q9C0D5 1861 aa10.23□□□□□ -0.77
ZNF548-206ENST00000597047 PVALEFA0A1B0GWK0 134 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms