RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 GBP3Q9H0R5 595 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 NRDE2Q9H7Z3 1164 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 KCNMB3Q9NPA1 279 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 FAM105AQ9NUU6 356 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 TBC1D13Q9NVG8 400 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 TPCN1Q9ULQ1 816 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 PIEZO1Q92508 2521 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.02■□□□□ 0.48
LIM2-202ENST00000596399 CCDC194A0A1B0GVG4 234 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 FSD2A1L4K1 749 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 CCNT1O60563 726 aaKnown RBP18.02■□□□□ 0.48
LIM2-202ENST00000596399 OFD1O75665 1012 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 QARSP47897 775 aaKnown RBP18.02■□□□□ 0.48
LIM2-202ENST00000596399 PPP2R5CQ13362 524 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 GALNT17Q6IS24 598 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 CPLX2Q6PUV4 134 aaKnown RBP18.02■□□□□ 0.48
LIM2-202ENST00000596399 PIK3AP1Q6ZUJ8 805 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 BMP8AQ7Z5Y6 402 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 ZNF410Q86VK4 478 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 ZNF280BQ86YH2 543 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 ASIC4Q96FT7 647 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 TMEM169Q96HH4 297 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 CEP170P1Q96L14 293 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 TRAIPQ9BWF2 469 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 VN1R3Q9BXE9 311 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 ZBP1Q9H171 429 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 POMKQ9H5K3 350 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 RGL1Q9NZL6 768 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 COL4A3BPQ9Y5P4 624 aa18.02■□□□□ 0.48
LIM2-202ENST00000596399 CTDNEP1O95476 244 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 GALTP07902 379 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 SRGAP2CP0DJJ0 459 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 EPCAMP16422 314 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 HOXB8P17481 243 aaPredicted RBP18.01■□□□□ 0.47
LIM2-202ENST00000596399 CDC42EP1Q00587 391 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 SIGLEC14Q08ET2 396 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 PTPN21Q16825 1174 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 NOMO2Q5JPE7 1267 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 RARS2Q5T160 578 aaKnown RBP18.01■□□□□ 0.47
LIM2-202ENST00000596399 NEK8Q86SG6 692 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
LIM2-202ENST00000596399 CASP10Q92851 521 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 IGSF21Q96ID5 467 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 KCNH6Q9H252 994 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 SMOC2Q9H3U7 446 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 PCDHB2Q9Y5E7 798 aa18.01■□□□□ 0.47
LIM2-202ENST00000596399 C2CD4DB7Z1M9 353 aa18■□□□□ 0.47
LIM2-202ENST00000596399 EPB41L2O43491 1005 aaKnown RBP18■□□□□ 0.47
LIM2-202ENST00000596399 PDGFBP01127 241 aaPredicted RBP18■□□□□ 0.47
LIM2-202ENST00000596399 SLC11A1P49279 550 aa18■□□□□ 0.47
LIM2-202ENST00000596399 POLGP54098 1239 aaPredicted RBP18■□□□□ 0.47
LIM2-202ENST00000596399 VCPP55072 806 aaKnown RBP18■□□□□ 0.47
LIM2-202ENST00000596399 NCAPH2Q6IBW4 605 aa18■□□□□ 0.47
LIM2-202ENST00000596399 PPP4R3AQ6IN85 833 aa18■□□□□ 0.47
LIM2-202ENST00000596399 GLB1LQ6UWU2 654 aa18■□□□□ 0.47
LIM2-202ENST00000596399 AGMOQ6ZNB7 445 aa18■□□□□ 0.47
LIM2-202ENST00000596399 FBXL6Q8N531 539 aa18■□□□□ 0.47
LIM2-202ENST00000596399 DYDC2Q96IM9 177 aa18■□□□□ 0.47
LIM2-202ENST00000596399 LXNQ9BS40 222 aa18■□□□□ 0.47
LIM2-202ENST00000596399 INO80BQ9C086 356 aaPredicted RBP18■□□□□ 0.47
LIM2-202ENST00000596399 ADAM7Q9H2U9 754 aa18■□□□□ 0.47
LIM2-202ENST00000596399 AGPAT5Q9NUQ2 364 aa18■□□□□ 0.47
LIM2-202ENST00000596399 USP34Q70CQ2 3546 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 PFKFB2O60825 505 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 ZNF623O75123 536 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 DDHD2O94830 711 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 P4HBP07237 508 aaKnown RBP17.99■□□□□ 0.47
LIM2-202ENST00000596399 HOXA11P31270 313 aaPredicted RBP17.99■□□□□ 0.47
LIM2-202ENST00000596399 CYP4A11Q02928 519 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 RNASELQ05823 741 aaKnown RBP17.99■□□□□ 0.47
LIM2-202ENST00000596399 LAMTOR4Q0VGL1 99 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 NR5A1Q13285 461 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 CTTNQ14247 550 aaKnown RBP17.99■□□□□ 0.47
LIM2-202ENST00000596399 UBXN11Q5T124 520 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 DDX53Q86TM3 631 aaKnown RBP17.99■□□□□ 0.47
LIM2-202ENST00000596399 SLC7A3Q8WY07 619 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 FAM20AQ96MK3 541 aa17.99■□□□□ 0.47
LIM2-202ENST00000596399 DHX33Q9H6R0 707 aaKnown RBP17.99■□□□□ 0.47
LIM2-202ENST00000596399 SSBP05455 408 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIM2-202ENST00000596399 CTSAP10619 480 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 YWHABP31946 246 aaKnown RBP17.98■□□□□ 0.47
LIM2-202ENST00000596399 SPIRE1Q08AE8 756 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 TCF15Q12870 199 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 TPRNQ4KMQ1 711 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 CES5AQ6NT32 575 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 ZBTB33Q86T24 672 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 SUGP1Q8IWZ8 645 aaKnown RBP17.98■□□□□ 0.47
LIM2-202ENST00000596399 FAM177A1Q8N128 213 aaPredicted RBP17.98■□□□□ 0.47
LIM2-202ENST00000596399 NECAB1Q8N987 351 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 KREMEN2Q8NCW0 462 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 SLC22A17Q8WUG5 538 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 JPH2Q9BR39 696 aaPredicted RBP17.98■□□□□ 0.47
LIM2-202ENST00000596399 KMT2EQ8IZD2 1858 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 STK36Q9NRP7 1315 aa17.98■□□□□ 0.47
LIM2-202ENST00000596399 MARCH6O60337 910 aa17.97■□□□□ 0.47
LIM2-202ENST00000596399 CDKL5O76039 1030 aa17.97■□□□□ 0.47
LIM2-202ENST00000596399 BRD1O95696 1058 aa17.97■□□□□ 0.47
LIM2-202ENST00000596399 POMCP01189 267 aa17.97■□□□□ 0.47
LIM2-202ENST00000596399 SKIP12755 728 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms