RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 MED15Q96RN5 788 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 NTPCRQ9BSD7 190 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 MTG1Q9BT17 334 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 SRRTQ9BXP5 876 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 FGFBP2Q9BYJ0 223 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 IGKV6-21A0A0C4DH24 114 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 TRIM49BA6NDI0 452 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 ZBTB42B2RXF5 422 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 SLC16A4O15374 487 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 ASAP2O43150 1006 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 CALUO43852 315 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 F2P00734 622 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 TMOD1P28289 359 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 ABCD1P33897 745 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 NPTX2P47972 431 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 CASP5P51878 434 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 PMS1P54277 932 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 NCKAP1LP55160 1127 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 LRRC63Q05C16 580 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 GRIK4Q16099 956 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 BMT2Q1RMZ1 405 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 ZC2HC1CQ53FD0 456 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 TTI2Q6NXR4 508 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 HAUS6Q7Z4H7 955 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 CREBRFQ8IUR6 639 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 SYCP3Q8IZU3 236 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 METTL13Q8N6R0 699 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 DEPTORQ8TB45 409 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 PPM1EQ8WY54 764 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 KAT2BQ92831 832 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 ACCSQ96QU6 501 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 FIZ1Q96SL8 496 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 ST6GALNAC4Q9H4F1 302 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 TMEM206Q9H813 350 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 SAMSN1Q9NSI8 373 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 SUCLA2Q9P2R7 463 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 MAGEC2Q9UBF1 373 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 UBE4BO95155 1302 aa14.36□□□□□ -0.11
SHKBP1-209ENST00000595803 XIRP2A4UGR9 3374 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 MYH11P35749 1972 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 MYADML2A6NDP7 307 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 HAS3O00219 553 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 SMIM10L2AP0DMW4 78 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 SMIM10L2BP0DMW5 78 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 GNAT1P11488 350 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 GLRA2P23416 452 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 NAMPTP43490 491 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 MRPS5P82675 430 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 GTF2BQ00403 316 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 PURAQ00577 322 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 MXD4Q14582 209 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 FOXR2Q6PJQ5 311 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 MTHFD1LQ6UB35 978 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 PPP4R3CPQ6ZMV5 832 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 RNF180Q86T96 592 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 LRRC71Q8N4P6 559 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 CSGALNACT2Q8N6G5 542 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 PCSK9Q8NBP7 692 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 KLHDC9Q8NEP7 349 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 ANKRD20A12PQ8NF67 263 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 ASAP3Q8TDY4 903 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 PRPF31Q8WWY3 499 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 PSPC1Q8WXF1 523 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 BSNDQ8WZ55 320 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 BADQ92934 168 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 DUSP9Q99956 384 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 THAP9Q9H5L6 903 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 SETD4Q9NVD3 440 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 EXOC7Q9UPT5 735 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 NRCAMQ92823 1304 aa14.35□□□□□ -0.11
SHKBP1-209ENST00000595803 LRRIQ4A6NIV6 560 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 PDXKO00764 312 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 ADAMTS4O75173 837 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 C22orf31O95567 290 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 SERPINC1P01008 464 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 SCP2P22307 547 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 RPL13P26373 211 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 FKBP3Q00688 224 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 SPAG1Q07617 926 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 TFDP1Q14186 410 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 KCNA10Q16322 511 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 KSR1Q8IVT5 923 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 FAM114A1Q8IWE2 563 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 STRA6Q9BX79 667 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 TRIM5Q9C035 493 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 KCTD10Q9H3F6 313 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 PRDM5Q9NQX1 630 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 TYW1Q9NV66 732 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 ATP11BQ9Y2G3 1177 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 ARID2Q68CP9 1835 aa14.34□□□□□ -0.11
SHKBP1-209ENST00000595803 C17orf102A2RUQ5 167 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 DENND3A2RUS2 1198 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 K7ERI5 159 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 CETN3O15182 167 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 PPP1R37O75864 691 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 ADCY5O95622 1261 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 ASGR1P07306 291 aa14.33□□□□□ -0.12
SHKBP1-209ENST00000595803 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms