RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 PDE12Q6L8Q7 609 aaKnown RBP19.04■□□□□ 0.64
CCDC9-202ENST00000595659 RNF135Q8IUD6 432 aa19.04■□□□□ 0.64
CCDC9-202ENST00000595659 SLFN12Q8IYM2 578 aa19.04■□□□□ 0.64
CCDC9-202ENST00000595659 SLC39A11Q8N1S5 342 aa19.04■□□□□ 0.64
CCDC9-202ENST00000595659 PSPC1Q8WXF1 523 aaKnown RBP19.04■□□□□ 0.64
CCDC9-202ENST00000595659 CDCA3Q99618 268 aaPredicted RBP19.04■□□□□ 0.64
CCDC9-202ENST00000595659 DHX33Q9H6R0 707 aaKnown RBP19.04■□□□□ 0.64
CCDC9-202ENST00000595659 ZSWIM4Q9H7M6 989 aa19.04■□□□□ 0.64
CCDC9-202ENST00000595659 FAM105AQ9NUU6 356 aa19.04■□□□□ 0.64
CCDC9-202ENST00000595659 HCN4Q9Y3Q4 1203 aa19.04■□□□□ 0.64
CCDC9-202ENST00000595659 MYH9P35579 1960 aaKnown RBP19.04■□□□□ 0.64
CCDC9-202ENST00000595659 A0A087WWV3 80 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 ZC3H11AO75152 810 aaKnown RBP eCLIP19.03■□□□□ 0.64
CCDC9-202ENST00000595659 SLITRK3O94933 977 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 ATP2B1P20020 1258 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 PPM1AP35813 382 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 TECP42680 631 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 ALDH7A1P49419 539 aaKnown RBP19.03■□□□□ 0.64
CCDC9-202ENST00000595659 GUCY1B3Q02153 619 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 ST3GAL1Q11201 340 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 EMC2Q15006 297 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 CALCRLQ16602 461 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 OTUD6AQ7L8S5 288 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 TMEM173Q86WV6 379 aaPredicted RBP19.03■□□□□ 0.64
CCDC9-202ENST00000595659 DIS3L2Q8IYB7 885 aaKnown RBP19.03■□□□□ 0.64
CCDC9-202ENST00000595659 FAM122AQ96E09 287 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 EIF2AK1Q9BQI3 630 aaKnown RBP19.03■□□□□ 0.64
CCDC9-202ENST00000595659 GBP3Q9H0R5 595 aa19.03■□□□□ 0.64
CCDC9-202ENST00000595659 NGRNQ9NPE2 291 aaKnown RBP19.03■□□□□ 0.64
CCDC9-202ENST00000595659 PRR33A8MZF0 331 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 PLA2G5P39877 138 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 RFC5P40937 340 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 TXKP42681 527 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 TRIM29Q14134 588 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 NOMO2Q5JPE7 1267 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 ERICH6BQ5W0A0 696 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 GLB1LQ6UWU2 654 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 RNF149Q8NC42 400 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 RPGRIP1Q96KN7 1286 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 TRAIPQ9BWF2 469 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 MRPL9Q9BYD2 267 aaKnown RBP19.02■□□□□ 0.64
CCDC9-202ENST00000595659 AGPAT5Q9NUQ2 364 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 TBC1D13Q9NVG8 400 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 PCDHA12Q9UN75 941 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 PCDHB2Q9Y5E7 798 aa19.02■□□□□ 0.64
CCDC9-202ENST00000595659 FNDC1Q4ZHG4 1894 aaPredicted RBP19.01■□□□□ 0.63
CCDC9-202ENST00000595659 OFD1O75665 1012 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 CXCL14O95715 111 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 SKIP12755 728 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 AFF1P51825 1210 aaKnown RBP19.01■□□□□ 0.63
CCDC9-202ENST00000595659 KCNC3Q14003 757 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 SMC1AQ14683 1233 aaKnown RBP19.01■□□□□ 0.63
CCDC9-202ENST00000595659 ANKRD54Q6NXT1 300 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 FERMT3Q86UX7 667 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 EXOC8Q8IYI6 725 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 MRPL43Q8N983 215 aaKnown RBP19.01■□□□□ 0.63
CCDC9-202ENST00000595659 AUTS2Q8WXX7 1259 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 NRDE2Q9H7Z3 1164 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 TTC12Q9H892 705 aaPredicted RBP19.01■□□□□ 0.63
CCDC9-202ENST00000595659 CDH22Q9UJ99 828 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 PLXNA4Q9HCM2 1894 aa19.01■□□□□ 0.63
CCDC9-202ENST00000595659 C5orf42Q9H799 3197 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 C2orf71A6NGG8 1288 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 B4GALT3O60512 393 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 ZNF623O75123 536 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 GALTP07902 379 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 HOXA11P31270 313 aaPredicted RBP19■□□□□ 0.63
CCDC9-202ENST00000595659 RNASELQ05823 741 aaKnown RBP19■□□□□ 0.63
CCDC9-202ENST00000595659 SYCE2Q6PIF2 218 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 AGMOQ6ZNB7 445 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 SRGAP1Q7Z6B7 1085 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 ZNF280BQ86YH2 543 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 VPS52Q8N1B4 723 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 BCL7CQ8WUZ0 217 aaPredicted RBP19■□□□□ 0.63
CCDC9-202ENST00000595659 TCP11Q8WWU5 503 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 TMEM169Q96HH4 297 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 MTRQ99707 1265 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 S1PR5Q9H228 398 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 XPNPEP1Q9NQW7 623 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 DNAJB4Q9UDY4 337 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 PPME1Q9Y570 386 aa19■□□□□ 0.63
CCDC9-202ENST00000595659 NEMFO60524 1076 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 SP100P23497 879 aaPredicted RBP18.99■□□□□ 0.63
CCDC9-202ENST00000595659 RAB27AP51159 221 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 UBXN11Q5T124 520 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 TMEM184AQ6ZMB5 413 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 ASAP3Q8TDY4 903 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 PIGOQ8TEQ8 1089 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 SUSD6Q92537 303 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 PGBD4Q96DM1 585 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 HSD17B14Q9BPX1 270 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 PHF7Q9BWX1 381 aaPredicted RBP18.99■□□□□ 0.63
CCDC9-202ENST00000595659 TMEM60Q9H2L4 133 aa18.99■□□□□ 0.63
CCDC9-202ENST00000595659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.98■□□□□ 0.63
CCDC9-202ENST00000595659 LOC730098B7Z3J9 87 aa18.98■□□□□ 0.63
CCDC9-202ENST00000595659 CLASP2O75122 1294 aaKnown RBP18.98■□□□□ 0.63
CCDC9-202ENST00000595659 SRGAP2BP0DMP2 458 aa18.98■□□□□ 0.63
CCDC9-202ENST00000595659 MCM7P33993 719 aa18.98■□□□□ 0.63
CCDC9-202ENST00000595659 SLC11A1P49279 550 aa18.98■□□□□ 0.63
CCDC9-202ENST00000595659 HERC4Q5GLZ8 1057 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms