RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SEMA6BQ9H3T3 888 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 ZNF576Q9H609 170 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 CERS4Q9HA82 394 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 AGPAT5Q9NUQ2 364 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 RCOR1Q9UKL0 485 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 CFAP45Q9UL16 551 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 SZT2Q5T011 3432 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 TRIP11Q15643 1979 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 PLXNA4Q9HCM2 1894 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 B4GALT5O43286 388 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 TSPAN1O60635 241 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 EDN1P05305 212 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 ZSCAN20P17040 1043 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 LIG1P18858 919 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 GUCY2CP25092 1073 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 TXLNAP40222 546 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 PEX3P56589 373 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 KRT85P78386 507 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 TAP1Q03518 808 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 RRAGBQ5VZM2 374 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 CDCA2Q69YH5 1023 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 TWF2Q6IBS0 349 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 GPR153Q6NV75 609 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 SLC24A5Q71RS6 500 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 NPAS4Q8IUM7 802 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 KCNG4Q8TDN1 519 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 LEO1Q8WVC0 666 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 LARP4BQ92615 738 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 KIFAP3Q92845 792 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 YME1L1Q96TA2 773 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 REEP2Q9BRK0 252 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 SLC28A3Q9HAS3 691 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 RC3H2Q9HBD1 1191 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 GDPD2Q9HCC8 539 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 C1orf112Q9NSG2 853 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 LRFN2Q9ULH4 789 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 USP20Q9Y2K6 914 aa15.25■□□□□ 0.03
SHKBP1-207ENST00000595631 LINC01553A4QN01 128 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 CCDC169A6NNP5 214 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 DGKIO75912 1065 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 ERLIN2O94905 339 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 FGFR1P11362 822 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 ATF7P17544 494 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 STAT6P42226 847 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 NAMPTP43490 491 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 NUCB2P80303 420 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 POU5F1BQ06416 359 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 GRIN2CQ14957 1233 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 AMHR2Q16671 573 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 LONRF3Q496Y0 759 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 TPRNQ4KMQ1 711 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 PAN2Q504Q3 1202 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 CDR2LQ86X02 465 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 ECHDC2Q86YB7 292 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 KCTD17Q8N5Z5 321 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 RNF169Q8NCN4 708 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 DEPTORQ8TB45 409 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 IFT74Q96LB3 600 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 SPATA32Q96LK8 384 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 GUCD1Q96NT3 240 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 NFKBIZQ9BYH8 718 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 RNF19AQ9NV58 838 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 MTMR10Q9NXD2 777 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 MTUS1Q9ULD2 1270 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 INSL6Q9Y581 213 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 PCDHB7Q9Y5E2 793 aa15.24■□□□□ 0.03
SHKBP1-207ENST00000595631 HOXA11P31270 313 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 NPTX2P47972 431 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 FAM189BP81408 668 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 PPP2R5AQ15172 486 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 UBXN11Q5T124 520 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 ZBTB8OSQ8IWT0 167 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 LPPQ93052 612 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 ZNF689Q96CS4 500 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 DRC1Q96MC2 740 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 CCDC113Q9H0I3 377 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 CHST12Q9NRB3 414 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 HCSTQ9UBK5 93 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 STK17AQ9UEE5 414 aa15.23■□□□□ 0.03
SHKBP1-207ENST00000595631 TMEM265A0A087WTH1 108 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 EPOPA6NHQ4 379 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 MEIS3P2A8K0S8 358 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 RFXAPO00287 272 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 SLC16A4O15374 487 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 KRT18P05783 430 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 STAG3L1P0CL83 205 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 ARF4P18085 180 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 GIT2Q14161 759 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 RESP18Q5W5W9 173 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 DYMQ7RTS9 669 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 ZNF598Q86UK7 904 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 STAMQ92783 540 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 DHX58Q96C10 678 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 C17orf80Q9BSJ5 609 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 TIPINQ9BVW5 301 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 EIF2AQ9BY44 585 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms