RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 EDIL3O43854 480 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 CXCL14O95715 111 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 MTHFRP42898 656 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 RAB27AP51159 221 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 CATSPER4Q7RTX7 472 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 AUTS2Q8WXX7 1259 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 LARP6Q9BRS8 491 aaKnown RBP16.53■□□□□ 0.24
PNKP-202ENST00000593706 GBP3Q9H0R5 595 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 ZBP1Q9H171 429 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 ADAM7Q9H2U9 754 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 PDRG1Q9NUG6 133 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 FAM86C1Q9NVL1 165 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 DZANK1Q9NVP4 752 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 SUCLA2Q9P2R7 463 aaPredicted RBP16.53■□□□□ 0.24
PNKP-202ENST00000593706 DEXIO95424 95 aa16.52■□□□□ 0.24
PNKP-202ENST00000593706 SEC24BO95487 1268 aa16.52■□□□□ 0.24
PNKP-202ENST00000593706 WEE2P0C1S8 567 aa16.52■□□□□ 0.24
PNKP-202ENST00000593706 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
PNKP-202ENST00000593706 PLA2G4FQ68DD2 849 aa16.52■□□□□ 0.24
PNKP-202ENST00000593706 TMEM173Q86WV6 379 aaPredicted RBP16.52■□□□□ 0.24
PNKP-202ENST00000593706 BLIDQ8IZY5 108 aa16.52■□□□□ 0.24
PNKP-202ENST00000593706 TDRD5Q8NAT2 981 aaKnown RBP16.52■□□□□ 0.24
PNKP-202ENST00000593706 JPH2Q9BR39 696 aaPredicted RBP16.52■□□□□ 0.24
PNKP-202ENST00000593706 FAM105AQ9NUU6 356 aa16.52■□□□□ 0.24
PNKP-202ENST00000593706 TBC1D13Q9NVG8 400 aa16.52■□□□□ 0.24
PNKP-202ENST00000593706 DDX25Q9UHL0 483 aaKnown RBP16.52■□□□□ 0.24
PNKP-202ENST00000593706 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
PNKP-202ENST00000593706 CYP3A7-CYP3A51PA0A087WV96 503 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 IGKV6-21A0A0C4DH24 114 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 MAFO75444 373 aaPredicted RBP16.51■□□□□ 0.23
PNKP-202ENST00000593706 PDGFBP01127 241 aaPredicted RBP16.51■□□□□ 0.23
PNKP-202ENST00000593706 EPCAMP16422 314 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 CYP3A7P24462 503 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 AVPR2P30518 371 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 POLGP54098 1239 aaPredicted RBP16.51■□□□□ 0.23
PNKP-202ENST00000593706 PSMC5P62195 406 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 GIT2Q14161 759 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 NONOQ15233 471 aaKnown RBP eCLIP16.51■□□□□ 0.23
PNKP-202ENST00000593706 KIAA1841Q6NSI8 718 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 CPLX2Q6PUV4 134 aaKnown RBP16.51■□□□□ 0.23
PNKP-202ENST00000593706 KSR1Q8IVT5 923 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 UBALD2Q8IYN6 164 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 URGCPQ8TCY9 931 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 ATOH1Q92858 354 aaPredicted RBP16.51■□□□□ 0.23
PNKP-202ENST00000593706 IGSF21Q96ID5 467 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 TRAIPQ9BWF2 469 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 IRF2BPLQ9H1B7 796 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
PNKP-202ENST00000593706 TPCN1Q9ULQ1 816 aa16.51■□□□□ 0.23
PNKP-202ENST00000593706 RIF1Q5UIP0 2472 aaKnown RBP16.51■□□□□ 0.23
PNKP-202ENST00000593706 DOCK8Q8NF50 2099 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 CTSAP10619 480 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 STK3Q13188 491 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 NPY5RQ15761 445 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 LETM2Q2VYF4 491 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 GALNT17Q6IS24 598 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 MOXD1Q6UVY6 613 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 B3GNT9Q6UX72 402 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 ANO5Q75V66 913 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 DDX53Q86TM3 631 aaKnown RBP16.5■□□□□ 0.23
PNKP-202ENST00000593706 C12orf76Q8N812 135 aaPredicted RBP16.5■□□□□ 0.23
PNKP-202ENST00000593706 DAGLBQ8NCG7 672 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 SLC7A3Q8WY07 619 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 PGBD4Q96DM1 585 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 CEP89Q96ST8 783 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 NRDE2Q9H7Z3 1164 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 CYP26B1Q9NR63 512 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 DNAJB4Q9UDY4 337 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 FAM186AA6NE01 2351 aa16.5■□□□□ 0.23
PNKP-202ENST00000593706 MEIS3P2A8K0S8 358 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 SLC37A4O43826 429 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 DKC1O60832 514 aaKnown RBP eCLIP16.49■□□□□ 0.23
PNKP-202ENST00000593706 STBD1O95210 358 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 BRD1O95696 1058 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 QARSP47897 775 aaKnown RBP16.49■□□□□ 0.23
PNKP-202ENST00000593706 SCRN1Q12765 414 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 INF2Q27J81 1249 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 ATAT1Q5SQI0 421 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 KRT25Q7Z3Z0 450 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 CABP7Q86V35 215 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 BCL7CQ8WUZ0 217 aaPredicted RBP16.49■□□□□ 0.23
PNKP-202ENST00000593706 AIFM3Q96NN9 605 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 AGPAT5Q9NUQ2 364 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 IRAK3Q9Y616 596 aa16.49■□□□□ 0.23
PNKP-202ENST00000593706 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 M0R2N6 131 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 ST18O60284 1047 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 GFRA3O60609 400 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 PFKFB2O60825 505 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 SSBP05455 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
PNKP-202ENST00000593706 ASGR2P07307 311 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 GALTP07902 379 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 SLC11A1P49279 550 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 AK2P54819 239 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 PTPN14Q15678 1187 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 KANK3Q6NY19 840 aa16.48■□□□□ 0.23
PNKP-202ENST00000593706 TMC5Q6UXY8 1006 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms