RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 KCNJ14Q9UNX9 436 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 INPP5FQ9Y2H2 1132 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-203ENST00000593641 CLASP2O75122 1294 aaKnown RBP25.38■■□□□ 1.65
SSBP4-203ENST00000593641 XBP1P17861 261 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 RNASELQ05823 741 aaKnown RBP25.38■■□□□ 1.65
SSBP4-203ENST00000593641 PPP2R5CQ13362 524 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 LONRF3Q496Y0 759 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 KSR1Q8IVT5 923 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 VPS52Q8N1B4 723 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 FBXL6Q8N531 539 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 FAM20AQ96MK3 541 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 CYP26B1Q9NR63 512 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 PDRG1Q9NUG6 133 aa25.38■■□□□ 1.65
SSBP4-203ENST00000593641 CACNA1HO95180 2353 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 CXCL14O95715 111 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 GCFC2P16383 781 aaKnown RBP25.37■■□□□ 1.65
SSBP4-203ENST00000593641 GIT2Q14161 759 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 NOMO2Q5JPE7 1267 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 NEK8Q86SG6 692 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 EXOC8Q8IYI6 725 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 PGBD4Q96DM1 585 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 ZBP1Q9H171 429 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 ADAM7Q9H2U9 754 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 TBC1D13Q9NVG8 400 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 VAV3Q9UKW4 847 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 COL4A3BPQ9Y5P4 624 aa25.37■■□□□ 1.65
SSBP4-203ENST00000593641 EML1O00423 815 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 MARCH6O60337 910 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 POLGP54098 1239 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-203ENST00000593641 PTPN5P54829 565 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 PPP4R3AQ6IN85 833 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 IGSF21Q96ID5 467 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 CEP170P1Q96L14 293 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 NAP1L4Q99733 375 aaKnown RBP25.36■■□□□ 1.65
SSBP4-203ENST00000593641 PHF20Q9BVI0 1012 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 NRDE2Q9H7Z3 1164 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 KCNMB3Q9NPA1 279 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 AGPAT5Q9NUQ2 364 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 PPME1Q9Y570 386 aa25.36■■□□□ 1.65
SSBP4-203ENST00000593641 ZNF623O75123 536 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 P4HBP07237 508 aaKnown RBP25.35■■□□□ 1.65
SSBP4-203ENST00000593641 MTHFRP42898 656 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 NPEPPSP55786 919 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 DDX53Q86TM3 631 aaKnown RBP25.35■■□□□ 1.65
SSBP4-203ENST00000593641 TMEM173Q86WV6 379 aaPredicted RBP25.35■■□□□ 1.65
SSBP4-203ENST00000593641 PRSS33Q8NF86 280 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 URGCPQ8TCY9 931 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 PSPC1Q8WXF1 523 aaKnown RBP25.35■■□□□ 1.65
SSBP4-203ENST00000593641 ASIC4Q96FT7 647 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 RIPOR3Q96MK2 946 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 GBP3Q9H0R5 595 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 POMKQ9H5K3 350 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 IFT122Q9HBG6 1241 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 DZANK1Q9NVP4 752 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 ARID2Q68CP9 1835 aa25.35■■□□□ 1.65
SSBP4-203ENST00000593641 MEIS3P2A8K0S8 358 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 CCNT1O60563 726 aaKnown RBP25.34■■□□□ 1.65
SSBP4-203ENST00000593641 OFD1O75665 1012 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 GALTP07902 379 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 CTSAP10619 480 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 RFC5P40937 340 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 SCRN1Q12765 414 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 IER5LQ5T953 404 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 CDH22Q9UJ99 828 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 PCDHB2Q9Y5E7 798 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 IRAK3Q9Y616 596 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 STK36Q9NRP7 1315 aa25.34■■□□□ 1.65
SSBP4-203ENST00000593641 TBX3O15119 743 aa25.33■■□□□ 1.65
SSBP4-203ENST00000593641 RARS2Q5T160 578 aaKnown RBP25.33■■□□□ 1.65
SSBP4-203ENST00000593641 PIK3AP1Q6ZUJ8 805 aa25.33■■□□□ 1.65
SSBP4-203ENST00000593641 SRGAP1Q7Z6B7 1085 aa25.33■■□□□ 1.65
SSBP4-203ENST00000593641 AUTS2Q8WXX7 1259 aa25.33■■□□□ 1.65
SSBP4-203ENST00000593641 LXNQ9BS40 222 aa25.33■■□□□ 1.65
SSBP4-203ENST00000593641 DHX33Q9H6R0 707 aaKnown RBP25.33■■□□□ 1.65
SSBP4-203ENST00000593641 GAS2O43903 313 aaKnown RBP25.32■■□□□ 1.64
SSBP4-203ENST00000593641 SRGAP2CP0DJJ0 459 aa25.32■■□□□ 1.64
SSBP4-203ENST00000593641 MTMR3Q13615 1198 aa25.32■■□□□ 1.64
SSBP4-203ENST00000593641 OTUD6AQ7L8S5 288 aa25.32■■□□□ 1.64
SSBP4-203ENST00000593641 KREMEN2Q8NCW0 462 aa25.32■■□□□ 1.64
SSBP4-203ENST00000593641 TCP11Q8WWU5 503 aa25.32■■□□□ 1.64
SSBP4-203ENST00000593641 TMEM143Q96AN5 459 aa25.32■■□□□ 1.64
SSBP4-203ENST00000593641 FAM193BQ96PV7 902 aaPredicted RBP25.32■■□□□ 1.64
SSBP4-203ENST00000593641 BMP2KQ9NSY1 1161 aaPredicted RBP25.32■■□□□ 1.64
SSBP4-203ENST00000593641 DNAJB4Q9UDY4 337 aa25.32■■□□□ 1.64
SSBP4-203ENST00000593641 STK39Q9UEW8 545 aa25.32■■□□□ 1.64
SSBP4-203ENST00000593641 C2CD4DB7Z1M9 353 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 YWHABP31946 246 aaKnown RBP25.31■■□□□ 1.64
SSBP4-203ENST00000593641 SLC11A1P49279 550 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 EPHA7Q15375 998 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 NCAPH2Q6IBW4 605 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 KIAA1841Q6NSI8 718 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 PPFIBP1Q86W92 1011 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 C4orf19Q8IY42 314 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 PRPF31Q8WWY3 499 aaKnown RBP25.31■■□□□ 1.64
SSBP4-203ENST00000593641 RSAD1Q9HA92 442 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 WRAP73Q9P2S5 460 aaPredicted RBP25.31■■□□□ 1.64
SSBP4-203ENST00000593641 SORCS3Q9UPU3 1222 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 CNTNAP2Q9UHC6 1331 aa25.31■■□□□ 1.64
SSBP4-203ENST00000593641 SPDYE4A6NLX3 237 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms