RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 CA8P35219 290 aa18.04■□□□□ 0.48
CIRBP-241ENST00000593048 ALDH7A1P49419 539 aaKnown RBP18.04■□□□□ 0.48
CIRBP-241ENST00000593048 COASYQ13057 564 aa18.04■□□□□ 0.48
CIRBP-241ENST00000593048 CALCRLQ16602 461 aa18.04■□□□□ 0.48
CIRBP-241ENST00000593048 TMC7Q7Z402 723 aa18.04■□□□□ 0.48
CIRBP-241ENST00000593048 ZNF598Q86UK7 904 aaKnown RBP18.04■□□□□ 0.48
CIRBP-241ENST00000593048 ZNF579Q8NAF0 562 aaKnown RBP18.04■□□□□ 0.48
CIRBP-241ENST00000593048 TCP11Q8WWU5 503 aa18.04■□□□□ 0.48
CIRBP-241ENST00000593048 PRPF31Q8WWY3 499 aaKnown RBP18.04■□□□□ 0.48
CIRBP-241ENST00000593048 NGRNQ9NPE2 291 aaKnown RBP18.04■□□□□ 0.48
CIRBP-241ENST00000593048 WRAP73Q9P2S5 460 aaPredicted RBP18.04■□□□□ 0.48
CIRBP-241ENST00000593048 PCDHA12Q9UN75 941 aa18.04■□□□□ 0.48
CIRBP-241ENST00000593048 ATG2AQ2TAZ0 1938 aa18.04■□□□□ 0.48
CIRBP-241ENST00000593048 WDR81Q562E7 1941 aa18.04■□□□□ 0.48
CIRBP-241ENST00000593048 BTBD18B2RXH4 712 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 FSCN2O14926 492 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 GAS2O43903 313 aaKnown RBP18.03■□□□□ 0.48
CIRBP-241ENST00000593048 JAK2O60674 1132 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 GLP2RO95838 553 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 ATF7P17544 494 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-241ENST00000593048 BMS1Q14692 1282 aaKnown RBP18.03■□□□□ 0.48
CIRBP-241ENST00000593048 DUSP6Q16828 381 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 GLB1LQ6UWU2 654 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 DIS3L2Q8IYB7 885 aaKnown RBP18.03■□□□□ 0.48
CIRBP-241ENST00000593048 RSPH1Q8WYR4 309 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 LPPQ93052 612 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 CCDC43Q96MW1 224 aaKnown RBP18.03■□□□□ 0.48
CIRBP-241ENST00000593048 TRAIPQ9BWF2 469 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 DHX33Q9H6R0 707 aaKnown RBP18.03■□□□□ 0.48
CIRBP-241ENST00000593048 FAM105AQ9NUU6 356 aa18.03■□□□□ 0.48
CIRBP-241ENST00000593048 ASAP2O43150 1006 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 TXKP42681 527 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 RAB27AP51159 221 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 BCAR1P56945 870 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 RNASELQ05823 741 aaKnown RBP18.02■□□□□ 0.48
CIRBP-241ENST00000593048 LAMTOR4Q0VGL1 99 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 EMC2Q15006 297 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 SAFBQ15424 915 aaKnown RBP eCLIP18.02■□□□□ 0.48
CIRBP-241ENST00000593048 SRGAP1Q7Z6B7 1085 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 TMEM87AQ8NBN3 555 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 SMRP1Q8NCR6 262 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 TNFRSF25Q93038 417 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 PGBD4Q96DM1 585 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 TMEM169Q96HH4 297 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 TBC1D32Q96NH3 1257 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 MTRQ99707 1265 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 EIF2AK1Q9BQI3 630 aaKnown RBP18.02■□□□□ 0.48
CIRBP-241ENST00000593048 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-241ENST00000593048 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 INPP5FQ9Y2H2 1132 aa18.02■□□□□ 0.48
CIRBP-241ENST00000593048 PLXNA4Q9HCM2 1894 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 NT5C1B-RDH14C9J2C7 533 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 ZBTB39O15060 712 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 NEMFO60524 1076 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 ZC3H11AO75152 810 aaKnown RBP eCLIP18.01■□□□□ 0.47
CIRBP-241ENST00000593048 SLITRK3O94933 977 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 RBM10P98175 930 aaKnown RBP18.01■□□□□ 0.47
CIRBP-241ENST00000593048 SPIRE1Q08AE8 756 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 LLGL2Q6P1M3 1020 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 SLC39A11Q8N1S5 342 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 RNF149Q8NC42 400 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 AGPAT5Q9NUQ2 364 aa18.01■□□□□ 0.47
CIRBP-241ENST00000593048 USP15Q9Y4E8 981 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-241ENST00000593048 CARNS1A5YM72 827 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 HIDE1A8MVS5 230 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 PRR33A8MZF0 331 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 ZNF623O75123 536 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 SEC24BO95487 1268 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 ATP2B1P20020 1258 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 TECP42680 631 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 SMC1AQ14683 1233 aaKnown RBP18■□□□□ 0.47
CIRBP-241ENST00000593048 NOMO2Q5JPE7 1267 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 FERMT3Q86UX7 667 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 URGCPQ8TCY9 931 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 GBP3Q9H0R5 595 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 LIMCH1Q9UPQ0 1083 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 PCDHB2Q9Y5E7 798 aa18■□□□□ 0.47
CIRBP-241ENST00000593048 ERLIN2O94905 339 aa17.99■□□□□ 0.47
CIRBP-241ENST00000593048 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
CIRBP-241ENST00000593048 GUCY1B3Q02153 619 aa17.99■□□□□ 0.47
CIRBP-241ENST00000593048 NCBP1Q09161 790 aaKnown RBP17.99■□□□□ 0.47
CIRBP-241ENST00000593048 MXD4Q14582 209 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-241ENST00000593048 RNF135Q8IUD6 432 aa17.99■□□□□ 0.47
CIRBP-241ENST00000593048 VN1R2Q8NFZ6 395 aa17.99■□□□□ 0.47
CIRBP-241ENST00000593048 MINDY3Q9H8M7 445 aa17.99■□□□□ 0.47
CIRBP-241ENST00000593048 TBC1D13Q9NVG8 400 aa17.99■□□□□ 0.47
CIRBP-241ENST00000593048 MUTYHQ9UIF7 546 aa17.99■□□□□ 0.47
CIRBP-241ENST00000593048 MEIS3P2A8K0S8 358 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 OFD1O75665 1012 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 CXCL14O95715 111 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 TFDP1Q14186 410 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 TMEM184AQ6ZMB5 413 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 CCDC83Q8IWF9 413 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 VPS52Q8N1B4 723 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 MRPL43Q8N983 215 aaKnown RBP17.98■□□□□ 0.47
CIRBP-241ENST00000593048 RPGRIP1Q96KN7 1286 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 FAM193BQ96PV7 902 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-241ENST00000593048 HSD17B14Q9BPX1 270 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 APOL5Q9BWW9 433 aa17.98■□□□□ 0.47
CIRBP-241ENST00000593048 PHF7Q9BWX1 381 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms