RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-221ENST00000593026 MYMKA6NI61 221 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 PLS3P13797 630 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 ATP2A2P16615 1042 aaKnown RBP16.49■□□□□ 0.23
DDX39A-221ENST00000593026 SYKP43405 635 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 NPTX2P47972 431 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 NDUFA8P51970 172 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 DEFB103AP81534 67 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 PCBP1Q15365 356 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX39A-221ENST00000593026 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX39A-221ENST00000593026 CEP57L1Q8IYX8 460 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 MYOCDQ8IZQ8 938 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 LINC01599Q8WXQ3 324 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 ADAM2Q99965 735 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 KIFC3Q9BVG8 833 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-221ENST00000593026 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 KMT5AQ9NQR1 393 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 KCNG1Q9UIX4 513 aa16.49■□□□□ 0.23
DDX39A-221ENST00000593026 PIN4Q9Y237 131 aaKnown RBP16.49■□□□□ 0.23
DDX39A-221ENST00000593026 ADGRA3Q8IWK6 1321 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 MYH11P35749 1972 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 ENPP3O14638 875 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 MGEA5O60502 916 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 SLFN14P0C7P3 912 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-221ENST00000593026 EFNA5P52803 228 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 SMTNP53814 917 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 AMPD3Q01432 767 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 LRIT3Q3SXY7 679 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 RTN4RL1Q86UN2 441 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-221ENST00000593026 PHOSPHO2Q8TCD6 241 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 SPIRE2Q8WWL2 714 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 STAMQ92783 540 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 GOLPH3LQ9H4A5 285 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 PARVGQ9HBI0 331 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 CHST12Q9NRB3 414 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 C1orf112Q9NSG2 853 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 USP25Q9UHP3 1055 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
DDX39A-221ENST00000593026 RANBP2P49792 3224 aaKnown RBP16.48■□□□□ 0.23
DDX39A-221ENST00000593026 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-221ENST00000593026 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-221ENST00000593026 TSPAN1O60635 241 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 IDEP14735 1019 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 LIG1P18858 919 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 ZNF131P52739 623 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 NCBP1Q09161 790 aaKnown RBP16.47■□□□□ 0.23
DDX39A-221ENST00000593026 DSC3Q14574 896 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 MAPK6Q16659 721 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-221ENST00000593026 MYCT1Q8N699 235 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 DNAJC19Q96DA6 116 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
DDX39A-221ENST00000593026 RGS18Q9NS28 235 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 PRMT7Q9NVM4 692 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-221ENST00000593026 DACT1Q9NYF0 836 aa16.47■□□□□ 0.23
DDX39A-221ENST00000593026 PHLPP2Q6ZVD8 1323 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 K7ERI5 159 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 SLC16A4O15374 487 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 ACTN4O43707 911 aaKnown RBP16.46■□□□□ 0.23
DDX39A-221ENST00000593026 PRKCBP05771 671 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 AXLP30530 894 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 AMHR2Q16671 573 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 FAM187BQ17R55 369 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 LONRF3Q496Y0 759 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 TWF2Q6IBS0 349 aaKnown RBP16.46■□□□□ 0.23
DDX39A-221ENST00000593026 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 SLC24A5Q71RS6 500 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 TMCO2Q7Z6W1 182 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-221ENST00000593026 HERC6Q8IVU3 1022 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 TMEM87AQ8NBN3 555 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 PRIMPOLQ96LW4 560 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 TRIM9Q9C026 710 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 CCDC113Q9H0I3 377 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 FZD8Q9H461 694 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 ARHGAP28Q9P2N2 729 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 PTPRSQ13332 1948 aa16.46■□□□□ 0.23
DDX39A-221ENST00000593026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-221ENST00000593026 GRXCR1A8MXD5 290 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 C9IYK1 514 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 H0YCG3 227 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 B4GALT5O43286 388 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 TRAK2O60296 914 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 UPP2O95045 317 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 GAP43P17677 238 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 ARF4P18085 180 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-221ENST00000593026 IBSPP21815 317 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-221ENST00000593026 HOXA11P31270 313 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-221ENST00000593026 AFMP43652 599 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 SARSP49591 514 aaKnown RBP16.45■□□□□ 0.22
DDX39A-221ENST00000593026 NCKAP1LP55160 1127 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 ASIC1P78348 528 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 FAM117BQ6P1L5 589 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 NOTUMQ6P988 496 aa16.45■□□□□ 0.22
DDX39A-221ENST00000593026 CCDC65Q8IXS2 484 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms