RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 SLC26A4O43511 780 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 PDIA4P13667 645 aaKnown RBP16.09■□□□□ 0.17
DDX39A-217ENST00000592391 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
DDX39A-217ENST00000592391 RAB27AP51159 221 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 PTPAQ15257 358 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 ZRSR1Q15695 479 aaKnown RBP16.09■□□□□ 0.17
DDX39A-217ENST00000592391 CCDC85BQ15834 202 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-217ENST00000592391 KCNK18Q7Z418 384 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 ABI1Q8IZP0 508 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 SLC17A8Q8NDX2 589 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 PNMA5Q96PV4 448 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 C11orf84Q9BUA3 381 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-217ENST00000592391 NT5C3AQ9H0P0 336 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 FAM105AQ9NUU6 356 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 CLIC4Q9Y696 253 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 RALGAPA2Q2PPJ7 1873 aa16.09■□□□□ 0.17
DDX39A-217ENST00000592391 TSPAN1O60635 241 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 ZNF623O75123 536 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 AXLP30530 894 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 NAMPTP43490 491 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 GRIN1Q05586 938 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 NCBP1Q09161 790 aaKnown RBP16.08■□□□□ 0.16
DDX39A-217ENST00000592391 AMHR2Q16671 573 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 PTPROQ16827 1216 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 TMEM119Q4V9L6 283 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 NAALADL2Q58DX5 795 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 CLLU1OSQ5K130 101 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 CDCA2Q69YH5 1023 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-217ENST00000592391 CABP7Q86V35 215 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 BSNDQ8WZ55 320 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 KIFAP3Q92845 792 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 P2RX5Q93086 422 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 CDK5RAP3Q96JB5 506 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 CASD1Q96PB1 797 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 PRUNE2Q8WUY3 3088 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 PRRC2BQ5JSZ5 2229 aaKnown RBP16.08■□□□□ 0.16
DDX39A-217ENST00000592391 NLRC5Q86WI3 1866 aa16.08■□□□□ 0.16
DDX39A-217ENST00000592391 UBA7P41226 1012 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 PPP2R5AQ15172 486 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 UBXN11Q5T124 520 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 NOTUMQ6P988 496 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.07■□□□□ 0.16
DDX39A-217ENST00000592391 ZBTB8OSQ8IWT0 167 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 LRRC43Q8N309 656 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 RSPH1Q8WYR4 309 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 MRPL38Q96DV4 380 aaKnown RBP16.07■□□□□ 0.16
DDX39A-217ENST00000592391 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 C2orf40Q9H1Z8 148 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 TYW1Q9NV66 732 aaKnown RBP16.07■□□□□ 0.16
DDX39A-217ENST00000592391 PCDHB2Q9Y5E7 798 aa16.07■□□□□ 0.16
DDX39A-217ENST00000592391 FNDC1Q4ZHG4 1894 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-217ENST00000592391 GRM6O15303 877 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 CEBPZQ03701 1054 aaKnown RBP16.06■□□□□ 0.16
DDX39A-217ENST00000592391 SPOUT1Q5T280 376 aaKnown RBP16.06■□□□□ 0.16
DDX39A-217ENST00000592391 RINT1Q6NUQ1 792 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 C1orf186Q6ZWK4 172 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 MRPL10Q7Z7H8 261 aaKnown RBP16.06■□□□□ 0.16
DDX39A-217ENST00000592391 SYT2Q8N9I0 419 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-217ENST00000592391 HELQQ8TDG4 1101 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 LPPQ93052 612 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 PGBD4Q96DM1 585 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 CALML4Q96GE6 196 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 CPB2Q96IY4 423 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 IFT74Q96LB3 600 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 PRIMPOLQ96LW4 560 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 PLIN2Q99541 437 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 RUSC1Q9BVN2 902 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 LMAN2LQ9H0V9 348 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 FZD8Q9H461 694 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 CWH43Q9H720 699 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 AAASQ9NRG9 546 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 PRMT7Q9NVM4 692 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-217ENST00000592391 HCSTQ9UBK5 93 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 PLAGL2Q9UPG8 496 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 PCDHB12Q9Y5F1 795 aa16.06■□□□□ 0.16
DDX39A-217ENST00000592391 SRPRBQ9Y5M8 271 aaKnown RBP16.06■□□□□ 0.16
DDX39A-217ENST00000592391 MORC2Q9Y6X9 1032 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-217ENST00000592391 B4GALT5O43286 388 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 ARF4P18085 180 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-217ENST00000592391 LAG3P18627 525 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 GUCY2CP25092 1073 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-217ENST00000592391 SLC12A3P55017 1021 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 FAM187BQ17R55 369 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 GLB1LQ6UWU2 654 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 LRRC55Q6ZSA7 311 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 DAW1Q8N136 415 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 KLHL23Q8NBE8 558 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 DEPTORQ8TB45 409 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 DRC1Q96MC2 740 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 TIPINQ9BVW5 301 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 MRPL9Q9BYD2 267 aaKnown RBP16.05■□□□□ 0.16
DDX39A-217ENST00000592391 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 POLD4Q9HCU8 107 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 PRDM6Q9NQX0 595 aa16.05■□□□□ 0.16
DDX39A-217ENST00000592391 FBXO2Q9UK22 296 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-217ENST00000592391 UNC80Q8N2C7 3258 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms