RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 H0YCG3 227 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 POLR2DO15514 142 aaKnown RBP10.75□□□□□ -0.69
TPM4-215ENST00000592138 AMHP03971 560 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 SSBP05455 408 aaKnown RBP eCLIP10.75□□□□□ -0.69
TPM4-215ENST00000592138 PLS3P13797 630 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 AXLP30530 894 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 ABCD1P33897 745 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 KCNJ6P48051 423 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 SMAD3P84022 425 aaKnown RBP10.75□□□□□ -0.69
TPM4-215ENST00000592138 AMPD3Q01432 767 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 MBTD1Q05BQ5 628 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 DMP1Q13316 513 aaPredicted RBP10.75□□□□□ -0.69
TPM4-215ENST00000592138 GIT2Q14161 759 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 DSC3Q14574 896 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 FAM187BQ17R55 369 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 CLEC17AQ6ZS10 378 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 MAEAQ7L5Y9 396 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 GPBP1Q86WP2 473 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 ZBTB8OSQ8IWT0 167 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 TMEM87AQ8NBN3 555 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 BSNDQ8WZ55 320 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 MRPS27Q92552 414 aaKnown RBP10.75□□□□□ -0.69
TPM4-215ENST00000592138 CHAMP1Q96JM3 812 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 TMX1Q9H3N1 280 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 RGS18Q9NS28 235 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 AGPAT5Q9NUQ2 364 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 PRMT7Q9NVM4 692 aaPredicted RBP10.75□□□□□ -0.69
TPM4-215ENST00000592138 DACT1Q9NYF0 836 aa10.75□□□□□ -0.69
TPM4-215ENST00000592138 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.74□□□□□ -0.69
TPM4-215ENST00000592138 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.74□□□□□ -0.69
TPM4-215ENST00000592138 FRMD3A2A2Y4 597 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 LRRIQ4A6NIV6 560 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 ZBBXA8MT70 800 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 ENPP3O14638 875 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 MYL1P05976 194 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 SLFN14P0C7P3 912 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 PFKFB1P16118 471 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
TPM4-215ENST00000592138 ZSCAN20P17040 1043 aaPredicted RBP10.74□□□□□ -0.69
TPM4-215ENST00000592138 NPTX2P47972 431 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
TPM4-215ENST00000592138 AMHR2Q16671 573 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 SLC24A5Q71RS6 500 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 CATSPER4Q7RTX7 472 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 CRIPAKQ8N1N5 446 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 PDILTQ8N807 584 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 DEPTORQ8TB45 409 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 LINC01599Q8WXQ3 324 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 RSPH1Q8WYR4 309 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 DDX12PQ92771 950 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 TOP1MTQ969P6 601 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 DHX58Q96C10 678 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 CCDC51Q96ER9 411 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 REEP2Q9BRK0 252 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 CCDC113Q9H0I3 377 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 FZD8Q9H461 694 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 TMEM134Q9H6X4 195 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 ELAC1Q9H777 363 aaKnown RBP10.74□□□□□ -0.69
TPM4-215ENST00000592138 MINDY3Q9H8M7 445 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 PARVGQ9HBI0 331 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 ARHGAP28Q9P2N2 729 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 SEL1LQ9UBV2 794 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 STXBP5LQ9Y2K9 1186 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 SCN5AQ14524 2016 aa10.74□□□□□ -0.69
TPM4-215ENST00000592138 COL4A6Q14031 1691 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 NCOR1O75376 2440 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 A0A0U1RQF3 1178 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 A0A1B0GVL5 298 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 DENND3A2RUS2 1198 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 GOLGA6L4A6NEF3 574 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 MYMKA6NI61 221 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 INO80B-WBP1J3KQ70 363 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 MGEA5O60502 916 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 TSPAN1O60635 241 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 TBCAO75347 108 aaKnown RBP10.73□□□□□ -0.69
TPM4-215ENST00000592138 ERLIN2O94905 339 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 GJB5O95377 273 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 KRT18P05783 430 aaKnown RBP10.73□□□□□ -0.69
TPM4-215ENST00000592138 MAPTP10636 758 aaKnown RBP10.73□□□□□ -0.69
TPM4-215ENST00000592138 SKIP12755 728 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 SYKP43405 635 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 SARSP49591 514 aaKnown RBP10.73□□□□□ -0.69
TPM4-215ENST00000592138 SMTNP53814 917 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 NCKAP1LP55160 1127 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 PEX3P56589 373 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 FAM189BP81408 668 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 DEFB103AP81534 67 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 NCBP1Q09161 790 aaKnown RBP10.73□□□□□ -0.69
TPM4-215ENST00000592138 MAPK6Q16659 721 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.73□□□□□ -0.696e-8■□□□□ 9.1
TPM4-215ENST00000592138 RTN4RL1Q86UN2 441 aaPredicted RBP10.73□□□□□ -0.69
TPM4-215ENST00000592138 HERC6Q8IVU3 1022 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 CEP57L1Q8IYX8 460 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 DNAJC19Q96DA6 116 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 ZNF668Q96K58 619 aaPredicted RBP10.73□□□□□ -0.69
TPM4-215ENST00000592138 ADAM2Q99965 735 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 PANK2Q9BZ23 570 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 ST6GALNAC4Q9H4F1 302 aa10.73□□□□□ -0.69
TPM4-215ENST00000592138 KMT5AQ9NQR1 393 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms