RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	REST	Q13127	1097 aa		18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	SF3A1	Q15459	793 aa	Known RBP	18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	CLLU1OS	Q5K130	101 aa		18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	ABI1	Q8IZP0	508 aa		18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	P2RX5	Q93086	422 aa		18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	AK8	Q96MA6	479 aa		18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	PRDM6	Q9NQX0	595 aa		18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	TYW1	Q9NV66	732 aa	Known RBP	18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	MTMR6	Q9Y217	621 aa		18.19	■□□□□ 0.5
CIRBP-233	ENST00000591622	STX6	O43752	255 aa		18.18	■□□□□ 0.5
CIRBP-233	ENST00000591622	TSPAN1	O60635	241 aa		18.18	■□□□□ 0.5
CIRBP-233	ENST00000591622	NCBP1	Q09161	790 aa	Known RBP	18.18	■□□□□ 0.5
CIRBP-233	ENST00000591622	NAALADL2	Q58DX5	795 aa		18.18	■□□□□ 0.5
CIRBP-233	ENST00000591622	HYI	Q5T013	277 aa		18.18	■□□□□ 0.5
CIRBP-233	ENST00000591622	KCTD17	Q8N5Z5	321 aa		18.18	■□□□□ 0.5
CIRBP-233	ENST00000591622	PLAGL2	Q9UPG8	496 aa		18.18	■□□□□ 0.5
CIRBP-233	ENST00000591622	PCDHB2	Q9Y5E7	798 aa		18.18	■□□□□ 0.5
CIRBP-233	ENST00000591622	REV3L	O60673	3130 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	LRRIQ4	A6NIV6	560 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	GRM6	O15303	877 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	AXL	P30530	894 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	SKIV2L	Q15477	1246 aa	Known RBP	18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	ZRSR1	Q15695	479 aa	Known RBP	18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	AMHR2	Q16671	573 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	UBXN11	Q5T124	520 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	SPOUT1	Q5T280	376 aa	Known RBP	18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	FAM173B	Q6P4H8	233 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	LRRC55	Q6ZSA7	311 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	KCNK18	Q7Z418	384 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	KLHL23	Q8NBE8	558 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	HELQ	Q8TDG4	1101 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	PNMA5	Q96PV4	448 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	NT5C3A	Q9H0P0	336 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	LMAN2L	Q9H0V9	348 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	CWH43	Q9H720	699 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	ALG13	Q9NP73	1137 aa	Known RBP	18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	AAAS	Q9NRG9	546 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	HCST	Q9UBK5	93 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	PCDHB12	Q9Y5F1	795 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	CLIC4	Q9Y696	253 aa		18.17	■□□□□ 0.5
CIRBP-233	ENST00000591622	RALGAPA2	Q2PPJ7	1873 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	HSP90AA1	P07900	732 aa	Known RBP	18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	NOTUM	Q6P988	496 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	MRPL10	Q7Z7H8	261 aa	Known RBP	18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	CABP7	Q86V35	215 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	LRRC43	Q8N309	656 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	RSPH1	Q8WYR4	309 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	BSND	Q8WZ55	320 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	KIFAP3	Q92845	792 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	LPP	Q93052	612 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	PGBD4	Q96DM1	585 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	CCDC51	Q96ER9	411 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	CDK5RAP3	Q96JB5	506 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	THEG	Q9P2T0	379 aa		18.16	■□□□□ 0.5
CIRBP-233	ENST00000591622	SLC26A4	O43511	780 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	ITGB1	P05556	798 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	LAG3	P18627	525 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	LONP1	P36776	959 aa	Known RBP	18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	UBA7	P41226	1012 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	NAMPT	P43490	491 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	PPP2R5A	Q15172	486 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	PTPA	Q15257	358 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	CSPP1	Q1MSJ5	1256 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	LONRF3	Q496Y0	759 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	TIGD5	Q53EQ6	642 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	GLB1L	Q6UWU2	654 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	ZBTB8OS	Q8IWT0	167 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	COLGALT1	Q8NBJ5	622 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	SPPL3	Q8TCT6	385 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	CPB2	Q96IY4	423 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	PLIN2	Q99541	437 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	MRPL9	Q9BYD2	267 aa	Known RBP	18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	C2orf40	Q9H1Z8	148 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	POLD4	Q9HCU8	107 aa		18.15	■□□□□ 0.5
CIRBP-233	ENST00000591622	MEIS3P2	A8K0S8	358 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	B4GALT5	O43286	388 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	ARF4	P18085	180 aa	Predicted RBP	18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	GRIN1	Q05586	938 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	TMEM119	Q4V9L6	283 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	RINT1	Q6NUQ1	792 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	PPP4R3CP	Q6ZMV5	832 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	C1orf186	Q6ZWK4	172 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	CNNM3	Q8NE01	707 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	IFT74	Q96LB3	600 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	PRIMPOL	Q96LW4	560 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	RUSC1	Q9BVN2	902 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	CSRNP2	Q9H175	543 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	FZD8	Q9H461	694 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	PRMT7	Q9NVM4	692 aa	Predicted RBP	18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622		A0A0C4DFX4	3053 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	NLRC5	Q86WI3	1866 aa		18.14	■□□□□ 0.49
CIRBP-233	ENST00000591622	XIRP2	A4UGR9	3374 aa		18.13	■□□□□ 0.49
CIRBP-233	ENST00000591622		A0A1B0GUA9	196 aa		18.13	■□□□□ 0.49
CIRBP-233	ENST00000591622	OFD1	O75665	1012 aa		18.13	■□□□□ 0.49
CIRBP-233	ENST00000591622	FGF18	O76093	207 aa		18.13	■□□□□ 0.49
CIRBP-233	ENST00000591622	PDIA4	P13667	645 aa	Known RBP	18.13	■□□□□ 0.49
CIRBP-233	ENST00000591622	NCL	P19338	710 aa	Known RBP	18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms