RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 CTAGE6Q86UF2 777 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 CCDC60Q8IWA6 550 aaPredicted RBP11.31□□□□□ -0.6
VPS25-206ENST00000591584 CTAGE4Q8IX94 777 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 LMBR1Q8WVP7 490 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 SLC7A3Q8WY07 619 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 FBXL18Q96ME1 805 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 MMP19Q99542 508 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
VPS25-206ENST00000591584 AZI2Q9H6S1 392 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 BCAS3Q9H6U6 928 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 MLXIPQ9HAP2 919 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 RBPJLQ9UBG7 517 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 RNF14Q9UBS8 474 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 APEX2Q9UBZ4 518 aa11.31□□□□□ -0.6
VPS25-206ENST00000591584 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 ZNF263O14978 683 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 STRNO43815 780 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 PLEKP08567 350 aaPredicted RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 TCP1P17987 556 aaKnown RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 SOX5P35711 763 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 NAMPTP43490 491 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 GCLCP48506 637 aaPredicted RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 POLGP54098 1239 aaPredicted RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 ITIH3Q06033 890 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 GFPT1Q06210 699 aaPredicted RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 STRN3Q13033 797 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 MOGSQ13724 837 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 NAB2Q15742 525 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 ERCC6LQ2NKX8 1250 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 ABRAQ8N0Z2 381 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 TCP11Q8WWU5 503 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 MFSD14AQ96MC6 490 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 PAGR1Q9BTK6 254 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS25-206ENST00000591584 LACRTQ9GZZ8 138 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 PORCNQ9H237 461 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 SIX2Q9NPC8 291 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 ARHGAP28Q9P2N2 729 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
VPS25-206ENST00000591584 DNAJC12Q9UKB3 198 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 FHOD1Q9Y613 1164 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 LOC285556D6RIA3 1793 aa11.3□□□□□ -0.6
VPS25-206ENST00000591584 A0A0G2JMZ2 1700 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 PAPPA2Q9BXP8 1791 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 A0A0A6YYK5 440 aaPredicted RBP11.29□□□□□ -0.6
VPS25-206ENST00000591584 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 ZC3H11AO75152 810 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS25-206ENST00000591584 MAFO75444 373 aaPredicted RBP11.29□□□□□ -0.6
VPS25-206ENST00000591584 LGR5O75473 907 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 PIGRP01833 764 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 ACTN1P12814 892 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 UBA1P22314 1058 aaKnown RBP11.29□□□□□ -0.6
VPS25-206ENST00000591584 ARL2P36404 184 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 ERVK-9P63128 1117 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 SP2Q02086 613 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 EMC2Q15006 297 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 ELF2Q15723 593 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
VPS25-206ENST00000591584 IER5Q5VY09 327 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 KRT39Q6A163 491 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 GPD1LQ8N335 351 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 GPRC5AQ8NFJ5 357 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 TSC1Q92574 1164 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 INTS2Q9H0H0 1204 aaKnown RBP11.29□□□□□ -0.6
VPS25-206ENST00000591584 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
VPS25-206ENST00000591584 GPRC5CQ9NQ84 441 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 XPNPEP1Q9NQW7 623 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 ADAMTS1Q9UHI8 967 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 COQ4Q9Y3A0 265 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 STYXL1Q9Y6J8 313 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 WDR90Q96KV7 1748 aa11.29□□□□□ -0.6
VPS25-206ENST00000591584 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
VPS25-206ENST00000591584 SCN4AP35499 1836 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 RCCD1A6NED2 376 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 ZNF233A6NK53 670 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 EXTL3O43909 919 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 GGPS1O95749 300 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 H2AFXP16104 143 aaPredicted RBP11.28□□□□□ -0.6
VPS25-206ENST00000591584 MXI1P50539 228 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
VPS25-206ENST00000591584 EFNA5P52803 228 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 PTK2Q05397 1052 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 TTLL4Q14679 1199 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 DRAP1Q14919 205 aaPredicted RBP11.28□□□□□ -0.6
VPS25-206ENST00000591584 BRD3Q15059 726 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 TARBP2Q15633 366 aaKnown RBP11.28□□□□□ -0.6
VPS25-206ENST00000591584 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
VPS25-206ENST00000591584 MTERF2Q49AM1 385 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 CELF3Q5SZQ8 465 aaKnown RBP11.28□□□□□ -0.6
VPS25-206ENST00000591584 CCDC70Q6NSX1 233 aa11.28□□□□□ -0.6
VPS25-206ENST00000591584 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms