RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 RBM10P98175 930 aaKnown RBP28.39■■■□□ 2.14
RUNDC3A-206ENST00000590941 MTERF2Q49AM1 385 aa28.39■■■□□ 2.14
RUNDC3A-206ENST00000590941 TRMT1LQ7Z2T5 733 aaKnown RBP28.39■■■□□ 2.14
RUNDC3A-206ENST00000590941 SLC7A3Q8WY07 619 aa28.39■■■□□ 2.14
RUNDC3A-206ENST00000590941 POLR3FQ9H1D9 316 aaPredicted RBP28.39■■■□□ 2.14
RUNDC3A-206ENST00000590941 DHX33Q9H6R0 707 aaKnown RBP28.39■■■□□ 2.14
RUNDC3A-206ENST00000590941 GARTP22102 1010 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 CBWD1Q9BRT8 395 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 STK33Q9BYT3 514 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 LACRTQ9GZZ8 138 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 MLXIPQ9HAP2 919 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 ARHGAP28Q9P2N2 729 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 TRIM10Q9UDY6 481 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 GSTTP1A0A1W2PQM5 241 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 GGPS1O95749 300 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 ABL1P00519 1130 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 GJA5P36382 358 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 FSTL1Q12841 308 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 SRGAP1Q7Z6B7 1085 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 PDCL2Q8N4E4 241 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 GOLGA1Q92805 767 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 INTS2Q9H0H0 1204 aaKnown RBP28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 AZI2Q9H6S1 392 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 KIAA1586Q9HCI6 787 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 APEX2Q9UBZ4 518 aa28.38■■■□□ 2.13
RUNDC3A-206ENST00000590941 RCCD1A6NED2 376 aa28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 GAS2O43903 313 aaKnown RBP28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 PEX10O60683 326 aa28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 CNGA1P29973 690 aa28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 NAMPTP43490 491 aa28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 STAT5BP51692 787 aa28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 IRF2BP2Q7Z5L9 587 aa28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 PORCNQ9H237 461 aa28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 PCIF1Q9H4Z3 704 aa28.37■■■□□ 2.13
RUNDC3A-206ENST00000590941 RRP9O43818 475 aaKnown RBP28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 GCLCP48506 637 aaPredicted RBP28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 GFPT1Q06210 699 aaPredicted RBP28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 ELF2Q15723 593 aa28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 PAPD7Q5XG87 772 aaKnown RBP28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 TMC2Q8TDI7 906 aa28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 BSNDQ8WZ55 320 aa28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 DDX41Q9UJV9 622 aaKnown RBP28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 USP20Q9Y2K6 914 aa28.36■■■□□ 2.13
RUNDC3A-206ENST00000590941 TRIM49P0CI25 452 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 TRIM49CP0CI26 452 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 AMPD2Q01433 879 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 Q3C1V9 767 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 CBWD6Q4V339 395 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 CBWD3Q5JTY5 395 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 CBWD5Q5RIA9 395 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 IQCEQ6IPM2 695 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 GPRC5AQ8NFJ5 357 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 FGD4Q96M96 766 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 FBXL18Q96ME1 805 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 JRKLQ9Y4A0 524 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 ATP4AP20648 1035 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 GTF2H1P32780 548 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 SLC26A2P50443 739 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 APBA1Q02410 837 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 STRN3Q13033 797 aa28.35■■■□□ 2.13
RUNDC3A-206ENST00000590941 BTNL10A8MVZ5 291 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 SOX5P35711 763 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 TCF7P36402 384 aaPredicted RBP28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 TARBP2Q15633 366 aaKnown RBP28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 SNRNP35Q16560 246 aaKnown RBP28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 ERCC6LQ2NKX8 1250 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 CELF3Q5SZQ8 465 aaKnown RBP28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 TRAPPC11Q7Z392 1133 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 EMSYQ7Z589 1322 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 ANKRD23Q86SG2 305 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 ABRAQ8N0Z2 381 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 RDH13Q8NBN7 331 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 BBXQ8WY36 941 aaPredicted RBP28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 RABGGTAQ92696 567 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 NOX5Q96PH1 765 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 SAR1BQ9Y6B6 198 aa28.34■■■□□ 2.13
RUNDC3A-206ENST00000590941 NOP56O00567 594 aaKnown RBP28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 HNRNPDLO14979 420 aaKnown RBP28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 LGR5O75473 907 aa28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 ARL2P36404 184 aa28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 CKAP4Q07065 602 aaKnown RBP28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 BMS1Q14692 1282 aaKnown RBP28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 WDR78Q5VTH9 848 aa28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 PLPPR4Q7Z2D5 763 aa28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 RPGRIP1Q96KN7 1286 aa28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 JPH2Q9BR39 696 aaPredicted RBP28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 PDCL3Q9H2J4 239 aa28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 ARGLU1Q9NWB6 273 aaPredicted RBP28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 DNAJC12Q9UKB3 198 aa28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 TELO2Q9Y4R8 837 aa28.33■■■□□ 2.13
RUNDC3A-206ENST00000590941 MACROD2A1Z1Q3 448 aa28.32■■■□□ 2.12
RUNDC3A-206ENST00000590941 F8VZ95 297 aa28.32■■■□□ 2.12
RUNDC3A-206ENST00000590941 SORBS3O60504 671 aa28.32■■■□□ 2.12
RUNDC3A-206ENST00000590941 PIGRP01833 764 aa28.32■■■□□ 2.12
RUNDC3A-206ENST00000590941 PGK2P07205 417 aa28.32■■■□□ 2.12
RUNDC3A-206ENST00000590941 MXI1P50539 228 aa28.32■■■□□ 2.12
RUNDC3A-206ENST00000590941 CHMP4BP1P59074 171 aa28.32■■■□□ 2.12
RUNDC3A-206ENST00000590941 ARID5AQ03989 594 aa28.32■■■□□ 2.12
RUNDC3A-206ENST00000590941 GPD1LQ8N335 351 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms