RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 RAVER2Q9HCJ3 691 aaKnown RBP18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 MRC1P22897 1456 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 DENND3A2RUS2 1198 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 RNF8O76064 485 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 CCHCR1Q8TD31 782 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 FAM213AQ9BRX8 229 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 GLI1P08151 1106 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 SYT2Q8N9I0 419 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 RIOX1Q9H6W3 641 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 SAYSD1Q9NPB0 183 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 SUCLA2Q9P2R7 463 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 RGPD1P0DJD0 1748 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 PHF20L1A8MW92 1017 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 RTN2O75298 545 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 PLS3P13797 630 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 PTGISQ16647 500 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 KRT39Q6A163 491 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 ADAM22Q9P0K1 906 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 BAZ2BQ9UIF8 2168 aaKnown RBP18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 KLRC4O43908 158 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 STK10O94804 968 aaKnown RBP18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 SNX16P57768 344 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 BSPRYQ5W0U4 402 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 WDR59Q6PJI9 974 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 SEPT14Q6ZU15 432 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 ARHGAP27Q6ZUM4 889 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 ZBTB33Q86T24 672 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 SCFD1Q8WVM8 642 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 RUSC1Q9BVN2 902 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 RSPH10B2B2RC85 870 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 RSPH10BP0C881 870 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 HAUS6Q7Z4H7 955 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 SRRM1Q8IYB3 904 aaKnown RBP18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 MORC4Q8TE76 937 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 CCDC160A6NGH7 325 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 H7C0C1 242 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 PHF2O75151 1096 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 GGPS1O95749 300 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 COPB2P35606 906 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 ATP5OP48047 213 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 FUT2Q10981 343 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 KDM7AQ6ZMT4 941 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 SH2D3AQ9BRG2 576 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 KLC4Q9NSK0 619 aa18.35■□□□□ 0.53
SMARCA4-215ENST00000590574 RNF225M0QZC1 329 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 FOXR1Q6PIV2 292 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 NKX2-3Q8TAU0 364 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 N4BP2L2Q92802 583 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 TBC1D22BQ9NU19 505 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 TMEM253P0C7T8 217 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 CHN1P15882 459 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 DCAF15Q66K64 600 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 TRIM59Q8IWR1 403 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 RMDN3Q96TC7 470 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 PRMT1Q99873 361 aaKnown RBP18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 NUDT12Q9BQG2 462 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 C11orf70Q9BRQ4 267 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 PITPNM3Q9BZ71 974 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 TXLNGQ9NUQ3 528 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 ECM2O94769 699 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 INHBAP08476 426 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 MSH2P43246 934 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 BYSLQ13895 437 aaKnown RBP18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 MEI1Q5TIA1 1274 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 AGBL2Q5U5Z8 902 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 DNAAF5Q86Y56 855 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 CREG2Q8IUH2 290 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 PARP9Q8IXQ6 854 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 BLOC1S4Q9NUP1 217 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 WDR91A4D1P6 747 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 WDR64B1ANS9 1081 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 RASA4BC9J798 803 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 RASA4O43374 803 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 FAM47EQ6ZV65 393 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 CYFIP2Q96F07 1278 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 MSTO1Q9BUK6 570 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 SCINQ9Y6U3 715 aa18.34■□□□□ 0.53
SMARCA4-215ENST00000590574 CA4P22748 312 aa18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 POLD1P28340 1107 aa18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 KRT17Q04695 432 aa18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 HHIPL2Q6UWX4 724 aa18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 HSPBP1Q9NZL4 362 aa18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 EIF3DO15371 548 aaKnown RBP eCLIP18.33■□□□□ 0.531e-8■□□□□ 9.3
SMARCA4-215ENST00000590574 TFAMQ00059 246 aaKnown RBP18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 PPP1R2P3Q6NXS1 205 aa18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 APBB1IPQ7Z5R6 666 aaPredicted RBP18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 PRR12Q9ULL5 1215 aa18.33■□□□□ 0.53
SMARCA4-215ENST00000590574 ASNSP08243 561 aa18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 LDHDQ86WU2 507 aa18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 JAMLQ86YT9 394 aa18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 RCCD1A6NED2 376 aa18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 PDE2AO00408 941 aaPredicted RBP18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 MSH4O15457 936 aa18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 CASP4P49662 377 aa18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 BASP1P80723 227 aaKnown RBP18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 FAM160B1Q5W0V3 765 aa18.33■□□□□ 0.52
SMARCA4-215ENST00000590574 ZNF571Q7Z3V5 609 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms