RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 KLRC2P26717 231 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 EXOSC10Q01780 885 aaKnown RBP19.53■□□□□ 0.72
RETREG3-210ENST00000590541 UGCGQ16739 394 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 GLB1LQ6UWU2 654 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 DGLUCYQ7Z3D6 616 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 ZNF280BQ86YH2 543 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 KIAA2013Q8IYS2 634 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 LENG9Q96B70 501 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 GCOM2Q9BZD3 368 aaPredicted RBP19.53■□□□□ 0.72
RETREG3-210ENST00000590541 FAM217BQ9NTX9 383 aaPredicted RBP19.53■□□□□ 0.72
RETREG3-210ENST00000590541 INPP5FQ9Y2H2 1132 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 EP300Q09472 2414 aaPredicted RBP19.52■□□□□ 0.72
RETREG3-210ENST00000590541 EPB41L2O43491 1005 aaKnown RBP19.52■□□□□ 0.72
RETREG3-210ENST00000590541 REC8O95072 547 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 RCAN1P53805 252 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 TBC1D8BQ0IIM8 1120 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 TARBP2Q15633 366 aaKnown RBP19.52■□□□□ 0.72
RETREG3-210ENST00000590541 PRR16Q569H4 304 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 ERICH6BQ5W0A0 696 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 TWF2Q6IBS0 349 aaKnown RBP19.52■□□□□ 0.72
RETREG3-210ENST00000590541 RIN2Q8WYP3 895 aaPredicted RBP19.52■□□□□ 0.72
RETREG3-210ENST00000590541 EMILIN2Q9BXX0 1053 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 GBP3Q9H0R5 595 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 DISC1Q9NRI5 854 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 FAM105AQ9NUU6 356 aa19.52■□□□□ 0.72
RETREG3-210ENST00000590541 A0A087WZ62 844 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 STK25O00506 426 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 ZBTB43O43298 467 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 SSBP05455 408 aaKnown RBP eCLIP19.51■□□□□ 0.71
RETREG3-210ENST00000590541 SKIP12755 728 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 CDC27P30260 824 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 CIITAP33076 1130 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 RNASELQ05823 741 aaKnown RBP19.51■□□□□ 0.71
RETREG3-210ENST00000590541 RASEFQ8IZ41 740 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 CMASQ8NFW8 434 aaPredicted RBP19.51■□□□□ 0.71
RETREG3-210ENST00000590541 KCNB2Q92953 911 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 CEP89Q96ST8 783 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 FDXACB1Q9BRP7 624 aaPredicted RBP19.51■□□□□ 0.71
RETREG3-210ENST00000590541 ZMYND12Q9H0C1 365 aa19.51■□□□□ 0.71
RETREG3-210ENST00000590541 PIN4Q9Y237 131 aaKnown RBP19.51■□□□□ 0.71
RETREG3-210ENST00000590541 ESYT2A0FGR8 921 aa19.5■□□□□ 0.71
RETREG3-210ENST00000590541 ZNF623O75123 536 aa19.5■□□□□ 0.71
RETREG3-210ENST00000590541 DDHD2O94830 711 aa19.5■□□□□ 0.71
RETREG3-210ENST00000590541 SFPQP23246 707 aaKnown RBP eCLIP19.5■□□□□ 0.71
RETREG3-210ENST00000590541 PFKFB3Q16875 520 aaPredicted RBP19.5■□□□□ 0.71
RETREG3-210ENST00000590541 SLC44A3Q8N4M1 653 aa19.5■□□□□ 0.71
RETREG3-210ENST00000590541 TCEANC2Q96MN5 208 aa19.5■□□□□ 0.71
RETREG3-210ENST00000590541 TBC1D17Q9HA65 648 aa19.5■□□□□ 0.71
RETREG3-210ENST00000590541 WDR6Q9NNW5 1121 aaKnown RBP19.5■□□□□ 0.71
RETREG3-210ENST00000590541 DLGAP2Q9P1A6 1054 aa19.5■□□□□ 0.71
RETREG3-210ENST00000590541 CA14Q9ULX7 337 aa19.5■□□□□ 0.71
RETREG3-210ENST00000590541 IGKV6-21A0A0C4DH24 114 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 GOLGA8AA7E2F4 631 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 GOLGA8BA8MQT2 603 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 EDIL3O43854 480 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 GBP2P32456 591 aaPredicted RBP19.49■□□□□ 0.71
RETREG3-210ENST00000590541 HSPA4P34932 840 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 AFF1P51825 1210 aaKnown RBP19.49■□□□□ 0.71
RETREG3-210ENST00000590541 CDC42EP1Q00587 391 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 PUM1Q14671 1186 aaKnown RBP eCLIP19.49■□□□□ 0.71
RETREG3-210ENST00000590541 ADCK5Q3MIX3 580 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 AGMOQ6ZNB7 445 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 MYADMQ96S97 322 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 MAN1C1Q9NR34 630 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 MRPL17Q9NRX2 175 aaKnown RBP19.49■□□□□ 0.71
RETREG3-210ENST00000590541 EPS15L1Q9UBC2 864 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 STK39Q9UEW8 545 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 WDR87Q6ZQQ6 2873 aa19.49■□□□□ 0.71
RETREG3-210ENST00000590541 CCDC195A0A1B0GUA6 201 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 TMEM150BA6NC51 233 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 MSH4O15457 936 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 CHMP2AO43633 222 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 STBD1O95210 358 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 DCNP07585 359 aaKnown RBP19.48■□□□□ 0.71
RETREG3-210ENST00000590541 SRFP11831 508 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 RAB27AP51159 221 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 FGD1P98174 961 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 MTERF2Q49AM1 385 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 SPECC1Q5M775 1068 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 REXO1Q8N1G1 1221 aaKnown RBP19.48■□□□□ 0.71
RETREG3-210ENST00000590541 SH2D3AQ9BRG2 576 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 NIFKQ9BYG3 293 aaKnown RBP19.48■□□□□ 0.71
RETREG3-210ENST00000590541 RHOBTB2Q9BYZ6 727 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 CLUHO75153 1309 aa19.48■□□□□ 0.71
RETREG3-210ENST00000590541 CCDC196A0A1B0GTZ2 297 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 SP9P0CG40 484 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 RFX1P22670 979 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 SFNP31947 248 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 NONOQ15233 471 aaKnown RBP eCLIP19.47■□□□□ 0.71
RETREG3-210ENST00000590541 PHLDB3Q6NSJ2 640 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 ZNF410Q86VK4 478 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 FBXL16Q8N461 479 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 DCLK2Q8N568 766 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 GPR152Q8TDT2 470 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 STAMQ92783 540 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 TMEM175Q9BSA9 504 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 INO80BQ9C086 356 aaPredicted RBP19.47■□□□□ 0.71
RETREG3-210ENST00000590541 UNC45AQ9H3U1 944 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 C6orf50Q9HD87 102 aa19.47■□□□□ 0.71
RETREG3-210ENST00000590541 DLL3Q9NYJ7 618 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms