RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 RASGRP4Q8TDF6 673 aa8.3□□□□□ -1.08
NEDD4L-229ENST00000590506 MAGEB18Q96M61 343 aa8.3□□□□□ -1.08
NEDD4L-229ENST00000590506 KRT82Q9NSB4 513 aa8.3□□□□□ -1.08
NEDD4L-229ENST00000590506 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.3□□□□□ -1.08
NEDD4L-229ENST00000590506 LARSQ9P2J5 1176 aaKnown RBP8.3□□□□□ -1.08
NEDD4L-229ENST00000590506 ARMCX3Q9UH62 379 aaPredicted RBP8.3□□□□□ -1.08
NEDD4L-229ENST00000590506 PFASO15067 1338 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 TNKSO95271 1327 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 MYH3P11055 1940 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 PSMG1O95456 288 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 ACSL3O95573 720 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 EYA4O95677 639 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 GCP02774 474 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 VAV1P15498 845 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 SERPINB3P29508 390 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 RPL21P46778 160 aaKnown RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 TRAPPC10P48553 1259 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 PTK2Q05397 1052 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 UBE3CQ15386 1083 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 ALX1Q15699 326 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 EXOC3L4Q17RC7 722 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 SH2D4BQ5SQS7 431 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 MFSD5Q6N075 450 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 NT5DC3Q86UY8 548 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 CYP4X1Q8N118 509 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 STKLD1Q8NE28 680 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 WDR60Q8WVS4 1066 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 RAPGEF4Q8WZA2 1011 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 SYN2Q92777 582 aaPredicted RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 ZNF184Q99676 751 aaPredicted RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 MIPEPQ99797 713 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 ASCC2Q9H1I8 757 aaPredicted RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 MTRF1LQ9UGC7 380 aaKnown RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 TBX22Q9Y458 520 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 WASF2Q9Y6W5 498 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 PITPNM2Q9BZ72 1349 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 CCDC88AQ3V6T2 1871 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 AKAP11Q9UKA4 1901 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 BTNL10A8MVZ5 291 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 MAGEB3O15480 346 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 VIL1P09327 827 aaKnown RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 PLCG2P16885 1265 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 PTPN4P29074 926 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 GJA8P48165 433 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 CDK7P50613 346 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 YARSP54577 528 aaKnown RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 HPCAP84074 193 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 MAP7Q14244 749 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 TAF1BQ53T94 588 aaPredicted RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 CNNM4Q6P4Q7 775 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 MARK2Q7KZI7 788 aaKnown RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 ZNF571Q7Z3V5 609 aaPredicted RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 LZICQ8WZA0 190 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 NR1H4Q96RI1 486 aaPredicted RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 MIS12Q9H081 205 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 SUCLA2Q9P2R7 463 aaPredicted RBP8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 CIDEBQ9UHD4 219 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 NFAT5O94916 1531 aa8.29□□□□□ -1.08
NEDD4L-229ENST00000590506 ATRNO75882 1429 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 FAM205AQ6ZU69 1335 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 LMTK3Q96Q04 1460 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 TCRBV5S4A2TA0A5A2 114 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 FAM187AA6NFU0 413 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 GSG1L2A8MUP6 293 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 SMIM22K7EJ46 135 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 FGFR1OPO95684 399 aaKnown RBP8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 KCNA6P17658 529 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 LRRC41Q15345 812 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 GSTA3Q16772 222 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 METTL24Q5JXM2 366 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 DCAF12L1Q5VU92 463 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 RFX8Q6ZV50 586 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 ZNF554Q86TJ5 538 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 CABP7Q86V35 215 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 GRAMD1AQ96CP6 724 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 HAUS1Q96CS2 278 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 C18orf8Q96DM3 657 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 C7orf25Q9BPX7 421 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 CADM1Q9BY67 442 aaKnown RBP8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 STK32BQ9NY57 414 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 AMFRQ9UKV5 643 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 PAIP2BQ9ULR5 123 aaKnown RBP8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 WDR37Q9Y2I8 494 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 AXIN2Q9Y2T1 843 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 RTL9Q8NET4 1388 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 DDX3XO00571 662 aaKnown RBP eCLIP8.28□□□□□ -1.082e-8■■□□□ 13.6
NEDD4L-229ENST00000590506 OR6B1O95007 311 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 PPP1R2P41236 205 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 ERFP50548 548 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 CDR2Q01850 454 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 DNAJC3Q13217 504 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 BTG3Q14201 252 aaPredicted RBP8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 SEC23AQ15436 765 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 AADACL2Q6P093 401 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 ALKBH5Q6P6C2 394 aaKnown RBP8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 LRRC55Q6ZSA7 311 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 GLIS3Q8NEA6 775 aa8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 SH3RF3Q8TEJ3 882 aaPredicted RBP8.28□□□□□ -1.08
NEDD4L-229ENST00000590506 ZNF653Q96CK0 615 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms