RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 NGLY1Q96IV0 654 aa17■□□□□ 0.31
MBD1-222ENST00000590208 IFT74Q96LB3 600 aa17■□□□□ 0.31
MBD1-222ENST00000590208 NAP1L3Q99457 506 aaPredicted RBP17■□□□□ 0.31
MBD1-222ENST00000590208 ETNK1Q9HBU6 452 aa17■□□□□ 0.31
MBD1-222ENST00000590208 RXFP1Q9HBX9 757 aa17■□□□□ 0.31
MBD1-222ENST00000590208 ZFATQ9P243 1243 aa17■□□□□ 0.31
MBD1-222ENST00000590208 ALG6Q9Y672 507 aa17■□□□□ 0.31
MBD1-222ENST00000590208 DPPA5A6NC42 116 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 MPHOSPH10O00566 681 aaKnown RBP16.99■□□□□ 0.31
MBD1-222ENST00000590208 MAP3K13O43283 966 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 PHF2O75151 1096 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 GJB6O95452 261 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 TMEM253P0C7T8 217 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 HOXA7P31268 230 aaPredicted RBP16.99■□□□□ 0.31
MBD1-222ENST00000590208 AP1ARQ63HQ0 302 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 CCDC137Q6PK04 289 aaKnown RBP16.99■□□□□ 0.31
MBD1-222ENST00000590208 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 GBP7Q8N8V2 638 aaPredicted RBP16.99■□□□□ 0.31
MBD1-222ENST00000590208 DNAJC17Q9NVM6 304 aaKnown RBP16.99■□□□□ 0.31
MBD1-222ENST00000590208 AHDC1Q5TGY3 1603 aaPredicted RBP16.99■□□□□ 0.31
MBD1-222ENST00000590208 NCANO14594 1321 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 RARGP13631 454 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 FERP16591 822 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 EIF6P56537 245 aaKnown RBP16.99■□□□□ 0.31
MBD1-222ENST00000590208 SNX1Q13596 522 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 TNIP1Q15025 636 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 BTNL9Q6UXG8 535 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 CCDC24Q8N4L8 307 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 TMEM109Q9BVC6 243 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 GPCPD1Q9NPB8 672 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 TRAF3IP3Q9Y228 551 aa16.99■□□□□ 0.31
MBD1-222ENST00000590208 ATP4AP20648 1035 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 TUBP50607 506 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 PABPC4Q13310 644 aaKnown RBP eCLIP16.98■□□□□ 0.31
MBD1-222ENST00000590208 DRAP1Q14919 205 aaPredicted RBP16.98■□□□□ 0.31
MBD1-222ENST00000590208 PPP2R5EQ16537 467 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
MBD1-222ENST00000590208 CLEC10AQ8IUN9 316 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 NT5C3AQ9H0P0 336 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 STMN4Q9H169 189 aaPredicted RBP16.98■□□□□ 0.31
MBD1-222ENST00000590208 PRKAG3Q9UGI9 489 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 RSPH10B2B2RC85 870 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 NR3C1P04150 777 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 RSPH10BP0C881 870 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 SOX5P35711 763 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 GNPTABQ3T906 1256 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 LRRC47Q8N1G4 583 aaKnown RBP16.98■□□□□ 0.31
MBD1-222ENST00000590208 CDC42EP4Q9H3Q1 356 aaKnown RBP16.98■□□□□ 0.31
MBD1-222ENST00000590208 ROBO3Q96MS0 1386 aa16.98■□□□□ 0.31
MBD1-222ENST00000590208 PDHA1P08559 390 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 CTCFP49711 727 aaPredicted RBP16.97■□□□□ 0.31
MBD1-222ENST00000590208 SLC12A3P55017 1021 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 MFSD5Q6N075 450 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 ECHDC2Q86YB7 292 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 CPNE8Q86YQ8 564 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 TMEM237Q96Q45 408 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
MBD1-222ENST00000590208 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
MBD1-222ENST00000590208 DIS3Q9Y2L1 958 aaKnown RBP16.97■□□□□ 0.31
MBD1-222ENST00000590208 SNED1Q8TER0 1413 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 PPP1R11O60927 126 aaPredicted RBP16.97■□□□□ 0.31
MBD1-222ENST00000590208 CHRNA3P32297 505 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 GIT2Q14161 759 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 CTTNQ14247 550 aaKnown RBP16.97■□□□□ 0.31
MBD1-222ENST00000590208 HYIQ5T013 277 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 ANO7Q6IWH7 933 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 CCDC105Q8IYK2 499 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 REEP2Q9BRK0 252 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 DNAJC12Q9UKB3 198 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 ASTN1O14525 1302 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 GM2AP17900 193 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 LMNB1P20700 586 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 ANXA13P27216 316 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 FAM47EQ6ZV65 393 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 NEDD1Q8NHV4 660 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 CKAP2Q8WWK9 683 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 TBK1Q9UHD2 729 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
MBD1-222ENST00000590208 SPDYE5A6NIY4 337 aa16.96■□□□□ 0.31
MBD1-222ENST00000590208 HIP1RO75146 1068 aa16.96■□□□□ 0.31
MBD1-222ENST00000590208 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
MBD1-222ENST00000590208 CCNG1P51959 295 aa16.96■□□□□ 0.31
MBD1-222ENST00000590208 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
MBD1-222ENST00000590208 ARHGAP44Q17R89 818 aa16.96■□□□□ 0.31
MBD1-222ENST00000590208 PCYOX1Q9UHG3 505 aa16.96■□□□□ 0.31
MBD1-222ENST00000590208 KDM3AQ9Y4C1 1321 aa16.96■□□□□ 0.31
MBD1-222ENST00000590208 SFI1A8K8P3 1242 aa16.96■□□□□ 0.3
MBD1-222ENST00000590208 LIN7AO14910 233 aaPredicted RBP16.96■□□□□ 0.3
MBD1-222ENST00000590208 UNC5CO95185 931 aa16.96■□□□□ 0.3
MBD1-222ENST00000590208 SMIM5Q71RC9 77 aa16.96■□□□□ 0.3
MBD1-222ENST00000590208 CYP4X1Q8N118 509 aa16.96■□□□□ 0.3
MBD1-222ENST00000590208 ART4Q93070 314 aa16.96■□□□□ 0.3
MBD1-222ENST00000590208 AAASQ9NRG9 546 aa16.96■□□□□ 0.3
MBD1-222ENST00000590208 KLHL14Q9P2G3 628 aa16.96■□□□□ 0.3
MBD1-222ENST00000590208 O00370 1275 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 PODXLO00592 558 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 LRRN2O75325 713 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 LUC7L3O95232 432 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms