RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 VN1R2Q8NFZ6 395 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 TCP11Q8WWU5 503 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 PRPF31Q8WWY3 499 aaKnown RBP13.66□□□□□ -0.22
VAT1-206ENST00000589709 PSPC1Q8WXF1 523 aaKnown RBP13.66□□□□□ -0.22
VAT1-206ENST00000589709 NLRP4Q96MN2 994 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 AGPAT5Q9NUQ2 364 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 PIN4Q9Y237 131 aaKnown RBP13.66□□□□□ -0.22
VAT1-206ENST00000589709 USP15Q9Y4E8 981 aaPredicted RBP13.66□□□□□ -0.22
VAT1-206ENST00000589709 FAM205CA6NFA0 338 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 LOC730098B7Z3J9 87 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 LARGE1O95461 756 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 HOXB8P17481 243 aaPredicted RBP13.65□□□□□ -0.22
VAT1-206ENST00000589709 PBX3P40426 434 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 BCAR1P56945 870 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 CBX2Q14781 532 aaPredicted RBP13.65□□□□□ -0.22
VAT1-206ENST00000589709 PCBP1Q15365 356 aaKnown RBP eCLIP13.65□□□□□ -0.22
VAT1-206ENST00000589709 HERC4Q5GLZ8 1057 aaPredicted RBP13.65□□□□□ -0.22
VAT1-206ENST00000589709 NCAPH2Q6IBW4 605 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 TMC7Q7Z402 723 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 MRPL10Q7Z7H8 261 aaKnown RBP13.65□□□□□ -0.22
VAT1-206ENST00000589709 RNF135Q8IUD6 432 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 MRPL43Q8N983 215 aaKnown RBP13.65□□□□□ -0.22
VAT1-206ENST00000589709 SUSD6Q92537 303 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 TMEM143Q96AN5 459 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 PGBD4Q96DM1 585 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 DYDC2Q96IM9 177 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 ENTPD7Q9NQZ7 604 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 PCDHA12Q9UN75 941 aa13.65□□□□□ -0.22
VAT1-206ENST00000589709 HIDE1A8MVS5 230 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 BTBD18B2RXH4 712 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 OFD1O75665 1012 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 SRGAP2CP0DJJ0 459 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
VAT1-206ENST00000589709 POU5F1BQ06416 359 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 CTTNQ14247 550 aaKnown RBP13.64□□□□□ -0.23
VAT1-206ENST00000589709 SMC1AQ14683 1233 aaKnown RBP13.64□□□□□ -0.23
VAT1-206ENST00000589709 BMS1Q14692 1282 aaKnown RBP13.64□□□□□ -0.23
VAT1-206ENST00000589709 EMC2Q15006 297 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 NOMO2Q5JPE7 1267 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 PLPP4Q5VZY2 271 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 ANKRD54Q6NXT1 300 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 FERMT3Q86UX7 667 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 TPH2Q8IWU9 490 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 DIS3L2Q8IYB7 885 aaKnown RBP13.64□□□□□ -0.23
VAT1-206ENST00000589709 FAM122AQ96E09 287 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 PHF7Q9BWX1 381 aaPredicted RBP13.64□□□□□ -0.23
VAT1-206ENST00000589709 S1PR5Q9H228 398 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 ANKEF1Q9NU02 776 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 TBC1D13Q9NVG8 400 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 PCDHB2Q9Y5E7 798 aa13.64□□□□□ -0.23
VAT1-206ENST00000589709 C2orf71A6NGG8 1288 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 ZBTB39O15060 712 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 JAK2O60674 1132 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.23
VAT1-206ENST00000589709 HOXA11P31270 313 aaPredicted RBP13.63□□□□□ -0.23
VAT1-206ENST00000589709 CYP4A11Q02928 519 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 TRIM29Q14134 588 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 MXD4Q14582 209 aaPredicted RBP13.63□□□□□ -0.23
VAT1-206ENST00000589709 CALCRLQ16602 461 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 SYCE2Q6PIF2 218 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
VAT1-206ENST00000589709 CNNM3Q8NE01 707 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 LPPQ93052 612 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 TMEM169Q96HH4 297 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 MTMR9Q96QG7 549 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 EIF2AK1Q9BQI3 630 aaKnown RBP13.63□□□□□ -0.23
VAT1-206ENST00000589709 NRDE2Q9H7Z3 1164 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 TTC12Q9H892 705 aaPredicted RBP13.63□□□□□ -0.23
VAT1-206ENST00000589709 MINDY3Q9H8M7 445 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 IRAK3Q9Y616 596 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 CNTNAP2Q9UHC6 1331 aa13.63□□□□□ -0.23
VAT1-206ENST00000589709 MEIS3P2A8K0S8 358 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 NEMFO60524 1076 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 DGAT1O75907 488 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 GALTP07902 379 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 TECP42680 631 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 PTENP60484 403 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 GIT2Q14161 759 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 AGMOQ6ZNB7 445 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 DDX53Q86TM3 631 aaKnown RBP13.62□□□□□ -0.23
VAT1-206ENST00000589709 RNF149Q8NC42 400 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 EDAQ92838 391 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 CASP10Q92851 521 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 IGSF21Q96ID5 467 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 MTRQ99707 1265 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 XPNPEP1Q9NQW7 623 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 KANSL3Q9P2N6 904 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 STK39Q9UEW8 545 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 MUTYHQ9UIF7 546 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 LIMCH1Q9UPQ0 1083 aa13.62□□□□□ -0.23
VAT1-206ENST00000589709 NT5C1B-RDH14C9J2C7 533 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 CLASP2O75122 1294 aaKnown RBP13.61□□□□□ -0.23
VAT1-206ENST00000589709 ZC3H11AO75152 810 aaKnown RBP eCLIP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms