RNA–Protein interactions for RNA: ENST00000589613.1

TUBG1-203, Transcript of tubulin gamma 1, humanhuman

TSL 1 (best)

Gene TUBG1, Length 916 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBG1-203ENST00000589613 LRRC43Q8N309 656 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 C4orf32Q8N8J7 132 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 MCPH1Q8NEM0 835 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 PRPF31Q8WWY3 499 aaKnown RBP11.29□□□□□ -0.6
TUBG1-203ENST00000589613 PPP2R3CQ969Q6 453 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 NLRP4Q96MN2 994 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 SH2D3AQ9BRG2 576 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 MRPL9Q9BYD2 267 aaKnown RBP11.29□□□□□ -0.6
TUBG1-203ENST00000589613 BACH2Q9BYV9 841 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 PRDM6Q9NQX0 595 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 AGPAT5Q9NUQ2 364 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 PCDHB12Q9Y5F1 795 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 NCOR1O75376 2440 aa11.29□□□□□ -0.6
TUBG1-203ENST00000589613 H3BQV1 296 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 SPATA31C1P0DKV0 1188 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 PPM1AP35813 382 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 ARL2P36404 184 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 TECP42680 631 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 PTENP60484 403 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 ZNF174Q15697 407 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 FAM102BQ5T8I3 360 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 PDE12Q6L8Q7 609 aaKnown RBP11.28□□□□□ -0.6
TUBG1-203ENST00000589613 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 IGSF22Q8N9C0 903 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 CNNM3Q8NE01 707 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 PGBD4Q96DM1 585 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 PABPC5Q96DU9 382 aaKnown RBP11.28□□□□□ -0.6
TUBG1-203ENST00000589613 CCDC51Q96ER9 411 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 XPNPEP1Q9NQW7 623 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
TUBG1-203ENST00000589613 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 PLAGL2Q9UPG8 496 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 SMC3Q9UQE7 1217 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 LZTS1Q9Y250 596 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 XIRP2A4UGR9 3374 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 VCANP13611 3396 aa11.28□□□□□ -0.6
TUBG1-203ENST00000589613 TBKBP1A7MCY6 615 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 ZBTB39O15060 712 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 GRM6O15303 877 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 MED24O75448 989 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 CD2BP2O95400 341 aaKnown RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 NCBP1Q09161 790 aaKnown RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 CUL4AQ13619 759 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 PAN2Q504Q3 1202 aaKnown RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 SPOUT1Q5T280 376 aaKnown RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 TWF2Q6IBS0 349 aaKnown RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 KSR1Q8IVT5 923 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 RNF149Q8NC42 400 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 SPPL3Q8TCT6 385 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 TMEM143Q96AN5 459 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 ZNF668Q96K58 619 aaPredicted RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 CASD1Q96PB1 797 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 CWH43Q9H720 699 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 UBE2ZQ9H832 354 aaPredicted RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 FAM105AQ9NUU6 356 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 RNF19AQ9NV58 838 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 LRWD1Q9UFC0 647 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 PIN4Q9Y237 131 aaKnown RBP11.27□□□□□ -0.61
TUBG1-203ENST00000589613 CNTNAP2Q9UHC6 1331 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 ZMYM2Q9UBW7 1377 aa11.27□□□□□ -0.61
TUBG1-203ENST00000589613 MYO7AQ13402 2215 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 SLC26A4O43511 780 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 ERLIN2O94905 339 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 ITGB1P05556 798 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 SRGAP2CP0DJJ0 459 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 FGFR1P11362 822 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 BMP1P13497 986 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 ATF7P17544 494 aaPredicted RBP11.26□□□□□ -0.61
TUBG1-203ENST00000589613 PDCP20941 246 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 FGFR4P22455 802 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 GATMP50440 423 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 PTGDRQ13258 359 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 LEXMQ3ZCV2 418 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 ARL6IP4Q66PJ3 421 aaKnown RBP11.26□□□□□ -0.61
TUBG1-203ENST00000589613 DTHD1Q6ZMT9 781 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 MRPL10Q7Z7H8 261 aaKnown RBP11.26□□□□□ -0.61
TUBG1-203ENST00000589613 KLHL23Q8NBE8 558 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 COLGALT1Q8NBJ5 622 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 PIGOQ8TEQ8 1089 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 UBN1Q9NPG3 1134 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 TYW1Q9NV66 732 aaKnown RBP11.26□□□□□ -0.61
TUBG1-203ENST00000589613 STK39Q9UEW8 545 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 PCDHB6Q9Y5E3 794 aa11.26□□□□□ -0.61
TUBG1-203ENST00000589613 ARHGEF35A5YM69 484 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 FGF18O76093 207 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 BMP15O95972 392 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 CYP11B2P19099 503 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 GLRA2P23416 452 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 CCT6AP40227 531 aaKnown RBP11.25□□□□□ -0.61
TUBG1-203ENST00000589613 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
TUBG1-203ENST00000589613 CAPSQ13938 189 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 PPP2R5AQ15172 486 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 CTC1Q2NKJ3 1217 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 TCEAL5Q5H9L2 206 aa11.25□□□□□ -0.61
TUBG1-203ENST00000589613 CLLU1OSQ5K130 101 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms