RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 CHTF18Q8WVB6 975 aa9.32□□□□□ -0.92
ATG4D-210ENST00000588972 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
ATG4D-210ENST00000588972 DUSP15Q9H1R2 295 aaPredicted RBP9.32□□□□□ -0.92
ATG4D-210ENST00000588972 EMC7Q9NPA0 242 aa9.32□□□□□ -0.92
ATG4D-210ENST00000588972 ZNF646O15015 1829 aaPredicted RBP9.32□□□□□ -0.92
ATG4D-210ENST00000588972 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
ATG4D-210ENST00000588972 CEP290O15078 2479 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 RANBP2P49792 3224 aaKnown RBP9.31□□□□□ -0.92
ATG4D-210ENST00000588972 WNT9AO14904 365 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 FKTNO75072 461 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 CAND2O75155 1236 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 ABLIM3O94929 683 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 GSTM1P09488 218 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 ATP2A2P16615 1042 aaKnown RBP9.31□□□□□ -0.92
ATG4D-210ENST00000588972 ADMP35318 185 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 CTSWP56202 376 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 RHBDL3P58872 404 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 CCDC152Q4G0S7 254 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 HABP4Q5JVS0 413 aaKnown RBP9.31□□□□□ -0.92
ATG4D-210ENST00000588972 OVCH1Q7RTY7 1134 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 TCEAL8Q8IYN2 117 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 MMP19Q99542 508 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 SPTLC3Q9NUV7 552 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 ZNF180Q9UJW8 692 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 LAMB1P07942 1786 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 KIF16BQ96L93 1317 aa9.31□□□□□ -0.92
ATG4D-210ENST00000588972 MED23Q9ULK4 1368 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 SOD2P04179 222 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 TRIM27P14373 513 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 PAMP19021 973 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 COL8A1P27658 744 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 INF2Q27J81 1249 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 ABCB5Q2M3G0 1257 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 FAM102BQ5T8I3 360 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 NXNQ6DKJ4 435 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 BEND7Q8N7W2 519 aaPredicted RBP9.3□□□□□ -0.92
ATG4D-210ENST00000588972 RHOBTB2Q9BYZ6 727 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 IPPKQ9H8X2 491 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 VTA1Q9NP79 307 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 SCAF8Q9UPN6 1271 aaKnown RBP9.3□□□□□ -0.92
ATG4D-210ENST00000588972 MYO3BQ8WXR4 1341 aa9.3□□□□□ -0.92
ATG4D-210ENST00000588972 A0A1B0GUL6 1792 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 COL1A1P02452 1464 aaPredicted RBP9.29□□□□□ -0.92
ATG4D-210ENST00000588972 CCDC66A2RUB6 948 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 GRM8O00222 908 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 NBPF7P0C2Y1 421 aaPredicted RBP9.29□□□□□ -0.92
ATG4D-210ENST00000588972 DNM2P50570 870 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 ERVK-21P61565 698 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 OCRLQ01968 901 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 PTPN21Q16825 1174 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 INAVAQ3KP66 663 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 FAM47CQ5HY64 1035 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 EPHA10Q5JZY3 1008 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 GORABQ5T7V8 394 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 MBLAC2Q68D91 279 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 ARMC9Q7Z3E5 817 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 ZAR1Q86SH2 424 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 CLEC10AQ8IUN9 316 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 EXOC8Q8IYI6 725 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 TTLL11Q8NHH1 800 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 TBC1D32Q96NH3 1257 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 FAM83CQ9BQN1 747 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 API5Q9BZZ5 524 aaKnown RBP9.29□□□□□ -0.92
ATG4D-210ENST00000588972 GREM2Q9H772 168 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 GPATCH2Q9NW75 528 aa9.29□□□□□ -0.92
ATG4D-210ENST00000588972 C9orf78Q9NZ63 289 aaPredicted RBP9.29□□□□□ -0.92
ATG4D-210ENST00000588972 PPARGC1AQ9UBK2 798 aaKnown RBP9.29□□□□□ -0.92
ATG4D-210ENST00000588972 NPHP3-ACAD11A0A0J9YXS1 232 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 PTPDC1A2A3K4 754 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 WNT10BO00744 389 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 DHX15O43143 795 aaKnown RBP9.28□□□□□ -0.92
ATG4D-210ENST00000588972 PRPF3O43395 683 aaKnown RBP9.28□□□□□ -0.92
ATG4D-210ENST00000588972 ULK1O75385 1050 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 RFPL1O75677 317 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 SYPP08247 313 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 ZSCAN20P17040 1043 aaPredicted RBP9.28□□□□□ -0.92
ATG4D-210ENST00000588972 MMP14P50281 582 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 KPNA1P52294 538 aaPredicted RBP9.28□□□□□ -0.92
ATG4D-210ENST00000588972 FOXO4P98177 505 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 UBE4AQ14139 1066 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 MLC1Q15049 377 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 DACT2Q5SW24 774 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 PRAMEF18Q5VWM3 479 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 ATF7IPQ6VMQ6 1270 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 C11orf74Q86VG3 221 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 TXNRD3Q86VQ6 643 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 TSPYL5Q86VY4 417 aaPredicted RBP9.28□□□□□ -0.92
ATG4D-210ENST00000588972 APOBEC3FQ8IUX4 373 aaKnown RBP9.28□□□□□ -0.92
ATG4D-210ENST00000588972 ANKRD18AQ8IVF6 992 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 MORC4Q8TE76 937 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 JPH3Q8WXH2 748 aaPredicted RBP9.28□□□□□ -0.92
ATG4D-210ENST00000588972 FBXW5Q969U6 566 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 SUCLG2Q96I99 432 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 PLA2G12BQ9BX93 195 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 PCDHA2Q9Y5H9 948 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 TRIOBPQ9H2D6 2365 aa9.28□□□□□ -0.92
ATG4D-210ENST00000588972 TRBV23OR9-2A0A075B6M9 112 aa9.27□□□□□ -0.93
ATG4D-210ENST00000588972 MANSC4A6NHS7 340 aaPredicted RBP9.27□□□□□ -0.93
ATG4D-210ENST00000588972 FAM47E-STBD1D6RA91 191 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms