RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ATF7P17544 494 aaPredicted RBP21.73■■□□□ 1.07
TPM4-208ENST00000588410 DNAJB1P25685 340 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 ARL2P36404 184 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 CCT6AP40227 531 aaKnown RBP21.73■■□□□ 1.07
TPM4-208ENST00000588410 TOB1P50616 345 aaPredicted RBP21.73■■□□□ 1.07
TPM4-208ENST00000588410 PTENP60484 403 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 PTGDRQ13258 359 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 CAMK1Q14012 370 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 PCBP1Q15365 356 aaKnown RBP eCLIP21.73■■□□□ 1.07
TPM4-208ENST00000588410 LONRF3Q496Y0 759 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 POTEGQ6S5H5 508 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 GLB1LQ6UWU2 654 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 LRRC55Q6ZSA7 311 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 MAEAQ7L5Y9 396 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 C4orf32Q8N8J7 132 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 MCPH1Q8NEM0 835 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 ASAP3Q8TDY4 903 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 RSPH1Q8WYR4 309 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 POLR3FQ9H1D9 316 aaPredicted RBP21.73■■□□□ 1.07
TPM4-208ENST00000588410 PUF60Q9UHX1 559 aaKnown RBP21.73■■□□□ 1.07
TPM4-208ENST00000588410 TRANK1O15050 2925 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 ARHGEF35A5YM69 484 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 LAD1O00515 517 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 ZNF623O75123 536 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 MUTP22033 750 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 PPM1AP35813 382 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 POU5F1BQ06416 359 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 HYAL1Q12794 435 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 RILPL1Q5EBL4 403 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 KCNT2Q6UVM3 1135 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 LPPQ93052 612 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 PCDHB2Q9Y5E7 798 aa21.72■■□□□ 1.07
TPM4-208ENST00000588410 H3BQ06 376 aaPredicted RBP21.71■■□□□ 1.07
TPM4-208ENST00000588410 GLRA2P23416 452 aa21.71■■□□□ 1.07
TPM4-208ENST00000588410 IRS1P35568 1242 aa21.71■■□□□ 1.07
TPM4-208ENST00000588410 KRT17Q04695 432 aa21.71■■□□□ 1.07
TPM4-208ENST00000588410 CAPSQ13938 189 aa21.71■■□□□ 1.07
TPM4-208ENST00000588410 PDIA5Q14554 519 aa21.71■■□□□ 1.07
TPM4-208ENST00000588410 PUS10Q3MIT2 529 aaKnown RBP21.71■■□□□ 1.07
TPM4-208ENST00000588410 NECAB3Q96P71 396 aaPredicted RBP21.71■■□□□ 1.07
TPM4-208ENST00000588410 TLR9Q9NR96 1032 aa21.71■■□□□ 1.07
TPM4-208ENST00000588410 SPG21Q9NZD8 308 aa21.71■■□□□ 1.07
TPM4-208ENST00000588410 INPP5FQ9Y2H2 1132 aa21.71■■□□□ 1.07
TPM4-208ENST00000588410 AXLP30530 894 aa21.7■■□□□ 1.06
TPM4-208ENST00000588410 HOXA11P31270 313 aaPredicted RBP21.7■■□□□ 1.06
TPM4-208ENST00000588410 ALDH7A1P49419 539 aaKnown RBP21.7■■□□□ 1.06
TPM4-208ENST00000588410 PLCB3Q01970 1234 aa21.7■■□□□ 1.06
TPM4-208ENST00000588410 LARP1BQ659C4 914 aaKnown RBP21.7■■□□□ 1.06
TPM4-208ENST00000588410 PTCRAQ6ISU1 281 aaPredicted RBP21.7■■□□□ 1.06
TPM4-208ENST00000588410 PADI6Q6TGC4 694 aa21.7■■□□□ 1.06
TPM4-208ENST00000588410 DTHD1Q6ZMT9 781 aa21.7■■□□□ 1.06
TPM4-208ENST00000588410 SNX29Q8TEQ0 813 aa21.7■■□□□ 1.06
TPM4-208ENST00000588410 MRPS27Q92552 414 aaKnown RBP21.7■■□□□ 1.06
TPM4-208ENST00000588410 LZTS1Q9Y250 596 aa21.7■■□□□ 1.06
TPM4-208ENST00000588410 LRRIQ4A6NIV6 560 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 TSPAN1O60635 241 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 PBX3P40426 434 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 PRPHP41219 470 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 RNASELQ05823 741 aaKnown RBP21.69■■□□□ 1.06
TPM4-208ENST00000588410 COL19A1Q14993 1142 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 NOMO2Q5JPE7 1267 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 KRT79Q5XKE5 535 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 PDE12Q6L8Q7 609 aaKnown RBP21.69■■□□□ 1.06
TPM4-208ENST00000588410 NOTUMQ6P988 496 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 IFNLR1Q8IU57 520 aaPredicted RBP21.69■■□□□ 1.06
TPM4-208ENST00000588410 CNNM3Q8NE01 707 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.69■■□□□ 1.06
TPM4-208ENST00000588410 URGCPQ8TCY9 931 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 CCDC51Q96ER9 411 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 NFKBIZQ9BYH8 718 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 TLE6Q9H808 572 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 GPRC5CQ9NQ84 441 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.69■■□□□ 1.06
TPM4-208ENST00000588410 FAM50BQ9Y247 325 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 CUL9Q8IWT3 2517 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 RALGAPA2Q2PPJ7 1873 aa21.69■■□□□ 1.06
TPM4-208ENST00000588410 CARNS1A5YM72 827 aa21.68■■□□□ 1.06
TPM4-208ENST00000588410 GTF2F1P35269 517 aaKnown RBP eCLIP21.68■■□□□ 1.061e-6■■■■□ 21.5
TPM4-208ENST00000588410 NRIP1P48552 1158 aa21.68■■□□□ 1.06
TPM4-208ENST00000588410 MBTD1Q05BQ5 628 aa21.68■■□□□ 1.06
TPM4-208ENST00000588410 MRPL10Q7Z7H8 261 aaKnown RBP21.68■■□□□ 1.06
TPM4-208ENST00000588410 ADGRD2Q7Z7M1 963 aa21.68■■□□□ 1.06
TPM4-208ENST00000588410 RBM23Q86U06 439 aaKnown RBP21.68■■□□□ 1.06
TPM4-208ENST00000588410 IGSF22Q8N9C0 903 aa21.68■■□□□ 1.06
TPM4-208ENST00000588410 BACH2Q9BYV9 841 aa21.68■■□□□ 1.06
TPM4-208ENST00000588410 ENTPD7Q9NQZ7 604 aa21.68■■□□□ 1.06
TPM4-208ENST00000588410 KIAA1024Q9UPX6 916 aa21.68■■□□□ 1.06
TPM4-208ENST00000588410 CNTNAP2Q9UHC6 1331 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 ZC3H11AO75152 810 aaKnown RBP eCLIP21.67■■□□□ 1.06
TPM4-208ENST00000588410 OFD1O75665 1012 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 CYP11B2P19099 503 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 NDUFV1P49821 464 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 BCAR1P56945 870 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 CTC1Q2NKJ3 1217 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 UBXN11Q5T124 520 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 ZBTB8OSQ8IWT0 167 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 CPB2Q96IY4 423 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 TRIM6Q9C030 488 aaPredicted RBP21.67■■□□□ 1.06
TPM4-208ENST00000588410 CSRNP2Q9H175 543 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 BHMT2Q9H2M3 363 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms