RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 TMEM143Q96AN5 459 aa18.95■□□□□ 0.62
TMED1-203ENST00000588259 MFSD14AQ96MC6 490 aa18.95■□□□□ 0.62
TMED1-203ENST00000588259 LXNQ9BS40 222 aa18.95■□□□□ 0.62
TMED1-203ENST00000588259 BRMS1Q9HCU9 246 aa18.95■□□□□ 0.62
TMED1-203ENST00000588259 FAM105AQ9NUU6 356 aa18.95■□□□□ 0.62
TMED1-203ENST00000588259 PIEZO1Q92508 2521 aa18.95■□□□□ 0.62
TMED1-203ENST00000588259 ZNF318Q5VUA4 2279 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.94■□□□□ 0.62
TMED1-203ENST00000588259 BAG4O95429 457 aaKnown RBP18.94■□□□□ 0.62
TMED1-203ENST00000588259 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
TMED1-203ENST00000588259 FOSBP53539 338 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 CYP4A11Q02928 519 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 ANKRD1Q15327 319 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 NOMO2Q5JPE7 1267 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 ZBTB33Q86T24 672 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 VPS52Q8N1B4 723 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 ZNF579Q8NAF0 562 aaKnown RBP18.94■□□□□ 0.62
TMED1-203ENST00000588259 SUSD6Q92537 303 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 CASP10Q92851 521 aa18.94■□□□□ 0.62
TMED1-203ENST00000588259 FAM205CA6NFA0 338 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 C2orf71A6NGG8 1288 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 CXCL14O95715 111 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 HOXB8P17481 243 aaPredicted RBP18.93■□□□□ 0.62
TMED1-203ENST00000588259 YWHABP31946 246 aaKnown RBP18.93■□□□□ 0.62
TMED1-203ENST00000588259 KRT2P35908 639 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 RFC5P40937 340 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 AK2P54819 239 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 TPRNQ4KMQ1 711 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 XKR9Q5GH70 373 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 SYCE2Q6PIF2 218 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 TMEM184AQ6ZMB5 413 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 EXOC8Q8IYI6 725 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 MRPL43Q8N983 215 aaKnown RBP18.93■□□□□ 0.62
TMED1-203ENST00000588259 NECAB1Q8N987 351 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 URGCPQ8TCY9 931 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 PRPF31Q8WWY3 499 aaKnown RBP18.93■□□□□ 0.62
TMED1-203ENST00000588259 AGPAT5Q9NUQ2 364 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 TBC1D13Q9NVG8 400 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 RGL1Q9NZL6 768 aa18.93■□□□□ 0.62
TMED1-203ENST00000588259 WRAP73Q9P2S5 460 aaPredicted RBP18.93■□□□□ 0.62
TMED1-203ENST00000588259 TMEM221A6NGB7 291 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 MEIS3P2A8K0S8 358 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 M0R296 226 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 TBX3O15119 743 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 LAMTOR4Q0VGL1 99 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 NR5A1Q13285 461 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 CTTNQ14247 550 aaKnown RBP18.92■□□□□ 0.62
TMED1-203ENST00000588259 EMC2Q15006 297 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 EPHA7Q15375 998 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 CES5AQ6NT32 575 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 TRIM67Q6ZTA4 783 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 OTUD6AQ7L8S5 288 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 TMEM173Q86WV6 379 aaPredicted RBP18.92■□□□□ 0.62
TMED1-203ENST00000588259 SLFN12Q8IYM2 578 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 AUTS2Q8WXX7 1259 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 RSPH1Q8WYR4 309 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 HAS1Q92839 578 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 PBXIP1Q96AQ6 731 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 PGBD4Q96DM1 585 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 DYDC2Q96IM9 177 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 CCDC43Q96MW1 224 aaKnown RBP18.92■□□□□ 0.62
TMED1-203ENST00000588259 TRAIPQ9BWF2 469 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 S1PR5Q9H228 398 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 IFT122Q9HBG6 1241 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 CDH22Q9UJ99 828 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 PCDHB2Q9Y5E7 798 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 HCFC2Q9Y5Z7 792 aa18.92■□□□□ 0.62
TMED1-203ENST00000588259 ZDBF2Q9HCK1 2354 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 SPDYE4A6NLX3 237 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 CLASP2O75122 1294 aaKnown RBP18.91■□□□□ 0.62
TMED1-203ENST00000588259 ERLIN2O94905 339 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 CTDNEP1O95476 244 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 ZXDAP98168 799 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 KCNC3Q14003 757 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 EARS2Q5JPH6 523 aaKnown RBP18.91■□□□□ 0.62
TMED1-203ENST00000588259 SRGAP1Q7Z6B7 1085 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 TPH2Q8IWU9 490 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 SUGP1Q8IWZ8 645 aaKnown RBP18.91■□□□□ 0.62
TMED1-203ENST00000588259 C4orf19Q8IY42 314 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 RNF149Q8NC42 400 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 TCP11Q8WWU5 503 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 FBXL18Q96ME1 805 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 DHX33Q9H6R0 707 aaKnown RBP18.91■□□□□ 0.62
TMED1-203ENST00000588259 ZSWIM4Q9H7M6 989 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 NRDE2Q9H7Z3 1164 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 PPME1Q9Y570 386 aa18.91■□□□□ 0.62
TMED1-203ENST00000588259 CARNS1A5YM72 827 aa18.9■□□□□ 0.62
TMED1-203ENST00000588259 ANAPC15P60006 121 aa18.9■□□□□ 0.62
TMED1-203ENST00000588259 TRIM29Q14134 588 aa18.9■□□□□ 0.62
TMED1-203ENST00000588259 RARS2Q5T160 578 aaKnown RBP18.9■□□□□ 0.62
TMED1-203ENST00000588259 IGSF21Q96ID5 467 aa18.9■□□□□ 0.62
TMED1-203ENST00000588259 FAM193BQ96PV7 902 aaPredicted RBP18.9■□□□□ 0.62
TMED1-203ENST00000588259 MTRQ99707 1265 aa18.9■□□□□ 0.62
TMED1-203ENST00000588259 DNAJB4Q9UDY4 337 aa18.9■□□□□ 0.62
TMED1-203ENST00000588259 NR2E1Q9Y466 385 aa18.9■□□□□ 0.62
TMED1-203ENST00000588259 ZBTB39O15060 712 aa18.89■□□□□ 0.61
TMED1-203ENST00000588259 GAS2O43903 313 aaKnown RBP18.89■□□□□ 0.61
TMED1-203ENST00000588259 ZNF623O75123 536 aa18.89■□□□□ 0.61
TMED1-203ENST00000588259 OFD1O75665 1012 aa18.89■□□□□ 0.61
TMED1-203ENST00000588259 SSBP05455 408 aaKnown RBP eCLIP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms