RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 AGPAT5Q9NUQ2 364 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 PRMT7Q9NVM4 692 aaPredicted RBP13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 TRIOBPQ9H2D6 2365 aa13.12□□□□□ -0.31
SDHDP1-201ENST00000588055 POLR2DO15514 142 aaKnown RBP13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 TLL1O43897 1013 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 SKIP12755 728 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 PLS3P13797 630 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 LIG1P18858 919 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 SCP2P22307 547 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 FGFR4P22455 802 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 CMA1P23946 247 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 AXLP30530 894 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 ABCD1P33897 745 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 RAB27AP51159 221 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 PEX3P56589 373 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 DEFB103AP81534 67 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 NPAS4Q8IUM7 802 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 HERC6Q8IVU3 1022 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 YME1L1Q96TA2 773 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 OSBPL7Q9BZF2 842 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 TRIM6Q9C030 488 aaPredicted RBP13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 PARVGQ9HBI0 331 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 GDPD2Q9HCC8 539 aa13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 LAMA2P24043 3122 aaKnown RBP13.11□□□□□ -0.31
SDHDP1-201ENST00000588055 A0A087X0B3 334 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 A0A1W2PQ27 194 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 A0A1W2PQ64 194 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 A0A1W2PQD8 194 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 HOXA2O43364 376 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 UPP2O95045 317 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 PRKCBP05771 671 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 PFKFB1P16118 471 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 NPTX2P47972 431 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 MBTD1Q05BQ5 628 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 STRN3Q13033 797 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 TCTN1Q2MV58 587 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 SLC24A5Q71RS6 500 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 HACE1Q8IYU2 909 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 MYCT1Q8N699 235 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 BSNDQ8WZ55 320 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 RGS18Q9NS28 235 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 USP25Q9UHP3 1055 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
SDHDP1-201ENST00000588055 NPHP3-ACAD11A0A0J9YXS1 232 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 K7ENM7 598 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 ENPP3O14638 875 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 TSPAN1O60635 241 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 GJB5O95377 273 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 IDEP14735 1019 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 GAP43P17677 238 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 DNAJB2P25686 324 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 SYKP43405 635 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 MAPK7Q13164 816 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 NAALADL2Q58DX5 795 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 DYMQ7RTS9 669 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 FAM178BQ8IXR5 827 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 LINC01599Q8WXQ3 324 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 GBF1Q92538 1859 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 DDX12PQ92771 950 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 ADPGKQ9BRR6 497 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 MINDY3Q9H8M7 445 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 SEL1LQ9UBV2 794 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
SDHDP1-201ENST00000588055 PTPRSQ13332 1948 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 TMEM265A0A087WTH1 108 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 K7ERI5 159 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 N4BP3O15049 544 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 SLC16A4O15374 487 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 MGEA5O60502 916 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 ASIC1P78348 528 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 GIT2Q14161 759 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 E2F4Q16254 413 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 ARSHQ5FYA8 562 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 ZNF697Q5TEC3 545 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 PPP2R2DQ66LE6 453 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms