RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 KLHL14Q9P2G3 628 aa6.82□□□□□ -1.32
TUBD1-208ENST00000588009 ANGEL1Q9UNK9 670 aaKnown RBP6.82□□□□□ -1.32
TUBD1-208ENST00000588009 GOLIM4O00461 696 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 CUTAO60888 179 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 RNASE1P07998 156 aaKnown RBP6.81□□□□□ -1.32
TUBD1-208ENST00000588009 XPAP23025 273 aaPredicted RBP6.81□□□□□ -1.32
TUBD1-208ENST00000588009 SSTR4P31391 388 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 TXKP42681 527 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 CACNB3P54284 484 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 NFATC3Q12968 1075 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 IL10RAQ13651 578 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 PLEKHN1Q494U1 663 aaPredicted RBP6.81□□□□□ -1.32
TUBD1-208ENST00000588009 ADGRF1Q5T601 910 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 RNF220Q5VTB9 566 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 ERAP2Q6P179 960 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 ZC3H14Q6PJT7 736 aaKnown RBP6.81□□□□□ -1.32
TUBD1-208ENST00000588009 IFNL2Q8IZJ0 200 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 GLB1L3Q8NCI6 653 aaPredicted RBP6.81□□□□□ -1.32
TUBD1-208ENST00000588009 WDR48Q8TAF3 677 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 ALG3Q92685 438 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 HIST1H2AHQ96KK5 128 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 HIST1H2AJQ99878 128 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 OR10A5Q9H207 317 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 GOLGA2P5Q9HBQ8 144 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 DMRT3Q9NQL9 472 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 SYNPO2Q9UMS6 1093 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 DMTF1Q9Y222 760 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 POLHQ9Y253 713 aa6.81□□□□□ -1.32
TUBD1-208ENST00000588009 CAPN8A6NHC0 703 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 NRP2O60462 931 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 TCEA3O75764 348 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 SETSIPP0DME0 302 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 ZKSCAN1P17029 563 aaPredicted RBP6.8□□□□□ -1.32
TUBD1-208ENST00000588009 TM4SF4P48230 202 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 IRAK1P51617 712 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 DSC2Q02487 901 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 PPP3CAQ08209 521 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 TMEM62Q0P6H9 643 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 SKIDA1Q1XH10 827 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 XRRA1Q6P2D8 792 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 C1orf228Q6PIY5 440 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 BMP8AQ7Z5Y6 402 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 DAAM2Q86T65 1068 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 KRTAP1-3Q8IUG1 177 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 FAM26EQ8N5C1 309 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 AGBL5Q8NDL9 886 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 ACRBPQ8NEB7 543 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 VPS37AQ8NEZ2 397 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 KAT5Q92993 513 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 DDX11Q96FC9 970 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 TBCBQ99426 244 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 APOL5Q9BWW9 433 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 KMT5AQ9NQR1 393 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 FNIP2Q9P278 1114 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 STXBP5LQ9Y2K9 1186 aa6.8□□□□□ -1.32
TUBD1-208ENST00000588009 CFAP20Q9Y6A4 193 aaKnown RBP6.8□□□□□ -1.32
TUBD1-208ENST00000588009 ABHD14A-ACY1A0A1B0GW23 586 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 BTBD11A6QL63 1104 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 KIAA1324LA8MWY0 1029 aaPredicted RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 SEC24DO94855 1032 aaPredicted RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 PAX3P23760 479 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 PEX2P28328 305 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 IL12RB1P42701 662 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 CHAF1AQ13111 956 aaPredicted RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 CNN3Q15417 329 aaKnown RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 STILQ15468 1287 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 INO80DQ53TQ3 878 aaPredicted RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 HSP90AB4PQ58FF6 505 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 LCE3BQ5TA77 95 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 KANK2Q63ZY3 851 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 CD300LDQ6UXZ3 194 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 ZC3H18Q86VM9 953 aaKnown RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 SKAP1Q86WV1 359 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 KRT78Q8N1N4 520 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 DTX3Q8N9I9 347 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 KLHDC4Q8TBB5 520 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 PGBD4Q96DM1 585 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 INTS4Q96HW7 963 aaKnown RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 PAWRQ96IZ0 340 aaKnown RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 CCDC138Q96M89 665 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 KRTAP4-12Q9BQ66 201 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 HAPLN2Q9GZV7 340 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 NUP62CLQ9H1M0 184 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 RBM12Q9NTZ6 932 aaKnown RBP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.79□□□□□ -1.32
TUBD1-208ENST00000588009 RTEL1Q9NZ71 1219 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 PCDHA13Q9Y5I0 950 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 NR2E3Q9Y5X4 410 aa6.79□□□□□ -1.32
TUBD1-208ENST00000588009 CCDC189A1A4V9 331 aa6.78□□□□□ -1.32
TUBD1-208ENST00000588009 MAFO75444 373 aaPredicted RBP6.78□□□□□ -1.32
TUBD1-208ENST00000588009 AFMP43652 599 aa6.78□□□□□ -1.32
TUBD1-208ENST00000588009 TRAPPC10P48553 1259 aa6.78□□□□□ -1.32
TUBD1-208ENST00000588009 MAP2K6P52564 334 aa6.78□□□□□ -1.32
TUBD1-208ENST00000588009 NRG3P56975 720 aa6.78□□□□□ -1.32
TUBD1-208ENST00000588009 YBX1P67809 324 aaKnown RBP6.78□□□□□ -1.32
TUBD1-208ENST00000588009 IL13RA1P78552 427 aa6.78□□□□□ -1.32
TUBD1-208ENST00000588009 MGAT2Q10469 447 aa6.78□□□□□ -1.32
TUBD1-208ENST00000588009 IFIT5Q13325 482 aaKnown RBP6.78□□□□□ -1.32
TUBD1-208ENST00000588009 KRT72Q14CN4 511 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms