RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 INPP5FQ9Y2H2 1132 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 KIAA1671Q9BY89 1806 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 SLITRK3O94933 977 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 PPM1AP35813 382 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 LAMTOR4Q0VGL1 99 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 XKR9Q5GH70 373 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 ERICH6BQ5W0A0 696 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 DIS3L2Q8IYB7 885 aaKnown RBP16.03■□□□□ 0.16
VMP1-206ENST00000587945 SLFN12Q8IYM2 578 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 PSPC1Q8WXF1 523 aaKnown RBP16.03■□□□□ 0.16
VMP1-206ENST00000587945 EIF2AK1Q9BQI3 630 aaKnown RBP16.03■□□□□ 0.16
VMP1-206ENST00000587945 TRAIPQ9BWF2 469 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 APOL5Q9BWW9 433 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 NGRNQ9NPE2 291 aaKnown RBP16.03■□□□□ 0.16
VMP1-206ENST00000587945 HCN4Q9Y3Q4 1203 aa16.03■□□□□ 0.16
VMP1-206ENST00000587945 FNDC1Q4ZHG4 1894 aaPredicted RBP16.02■□□□□ 0.16
VMP1-206ENST00000587945 PRR33A8MZF0 331 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 ZC3H11AO75152 810 aaKnown RBP eCLIP16.02■□□□□ 0.16
VMP1-206ENST00000587945 PLA2G5P39877 138 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 RFC5P40937 340 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 TECP42680 631 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 ALDH7A1P49419 539 aaKnown RBP16.02■□□□□ 0.16
VMP1-206ENST00000587945 KCNC3Q14003 757 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 EMC2Q15006 297 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 CALCRLQ16602 461 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 TMEM173Q86WV6 379 aaPredicted RBP16.02■□□□□ 0.16
VMP1-206ENST00000587945 MRPL9Q9BYD2 267 aaKnown RBP16.02■□□□□ 0.16
VMP1-206ENST00000587945 AGPAT5Q9NUQ2 364 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.16
VMP1-206ENST00000587945 A0A087WWV3 80 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 ZNF623O75123 536 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 OFD1O75665 1012 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 SKIP12755 728 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 HOXA11P31270 313 aaPredicted RBP16.01■□□□□ 0.15
VMP1-206ENST00000587945 CA8P35219 290 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 GUCY1B3Q02153 619 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 NOMO2Q5JPE7 1267 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 ANKRD54Q6NXT1 300 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 GLB1LQ6UWU2 654 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 FERMT3Q86UX7 667 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 MRPL43Q8N983 215 aaKnown RBP16.01■□□□□ 0.15
VMP1-206ENST00000587945 RNF149Q8NC42 400 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 FAM122AQ96E09 287 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 RPGRIP1Q96KN7 1286 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 S1PR5Q9H228 398 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 XPNPEP1Q9NQW7 623 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 TBC1D13Q9NVG8 400 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 PCDHA12Q9UN75 941 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 PPME1Q9Y570 386 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 C5orf42Q9H799 3197 aa16.01■□□□□ 0.15
VMP1-206ENST00000587945 PLXNA4Q9HCM2 1894 aa16■□□□□ 0.15
VMP1-206ENST00000587945 C2orf71A6NGG8 1288 aa16■□□□□ 0.15
VMP1-206ENST00000587945 LOC730098B7Z3J9 87 aa16■□□□□ 0.15
VMP1-206ENST00000587945 B4GALT3O60512 393 aa16■□□□□ 0.15
VMP1-206ENST00000587945 NEMFO60524 1076 aa16■□□□□ 0.15
VMP1-206ENST00000587945 CXCL14O95715 111 aa16■□□□□ 0.15
VMP1-206ENST00000587945 GALTP07902 379 aa16■□□□□ 0.15
VMP1-206ENST00000587945 ATP2B1P20020 1258 aa16■□□□□ 0.15
VMP1-206ENST00000587945 TXKP42681 527 aa16■□□□□ 0.15
VMP1-206ENST00000587945 RAB27AP51159 221 aa16■□□□□ 0.15
VMP1-206ENST00000587945 AFF1P51825 1210 aaKnown RBP16■□□□□ 0.15
VMP1-206ENST00000587945 TRIM29Q14134 588 aa16■□□□□ 0.15
VMP1-206ENST00000587945 SMC1AQ14683 1233 aaKnown RBP16■□□□□ 0.15
VMP1-206ENST00000587945 HERC4Q5GLZ8 1057 aaPredicted RBP16■□□□□ 0.15
VMP1-206ENST00000587945 UBXN11Q5T124 520 aa16■□□□□ 0.15
VMP1-206ENST00000587945 SYCE2Q6PIF2 218 aa16■□□□□ 0.15
VMP1-206ENST00000587945 TMEM184AQ6ZMB5 413 aa16■□□□□ 0.15
VMP1-206ENST00000587945 AGMOQ6ZNB7 445 aa16■□□□□ 0.15
VMP1-206ENST00000587945 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
VMP1-206ENST00000587945 EXOC8Q8IYI6 725 aa16■□□□□ 0.15
VMP1-206ENST00000587945 BCL7CQ8WUZ0 217 aaPredicted RBP16■□□□□ 0.15
VMP1-206ENST00000587945 TCP11Q8WWU5 503 aa16■□□□□ 0.15
VMP1-206ENST00000587945 AUTS2Q8WXX7 1259 aa16■□□□□ 0.15
VMP1-206ENST00000587945 SUSD6Q92537 303 aa16■□□□□ 0.15
VMP1-206ENST00000587945 TMEM169Q96HH4 297 aa16■□□□□ 0.15
VMP1-206ENST00000587945 MTRQ99707 1265 aa16■□□□□ 0.15
VMP1-206ENST00000587945 HSD17B14Q9BPX1 270 aa16■□□□□ 0.15
VMP1-206ENST00000587945 PHF7Q9BWX1 381 aaPredicted RBP16■□□□□ 0.15
VMP1-206ENST00000587945 TTC12Q9H892 705 aaPredicted RBP16■□□□□ 0.15
VMP1-206ENST00000587945 DNAJB4Q9UDY4 337 aa16■□□□□ 0.15
VMP1-206ENST00000587945 CDH22Q9UJ99 828 aa16■□□□□ 0.15
VMP1-206ENST00000587945 FSD2A1L4K1 749 aa15.99■□□□□ 0.15
VMP1-206ENST00000587945 CLASP2O75122 1294 aaKnown RBP15.99■□□□□ 0.15
VMP1-206ENST00000587945 RNASELQ05823 741 aaKnown RBP15.99■□□□□ 0.15
VMP1-206ENST00000587945 ZNF280BQ86YH2 543 aa15.99■□□□□ 0.15
VMP1-206ENST00000587945 CCDC83Q8IWF9 413 aa15.99■□□□□ 0.15
VMP1-206ENST00000587945 VPS52Q8N1B4 723 aa15.99■□□□□ 0.15
VMP1-206ENST00000587945 PIGOQ8TEQ8 1089 aa15.99■□□□□ 0.15
VMP1-206ENST00000587945 PGBD4Q96DM1 585 aa15.99■□□□□ 0.15
VMP1-206ENST00000587945 MTMR9Q96QG7 549 aa15.99■□□□□ 0.15
VMP1-206ENST00000587945 TMEM60Q9H2L4 133 aa15.99■□□□□ 0.15
VMP1-206ENST00000587945 ASAP2O43150 1006 aa15.98■□□□□ 0.15
VMP1-206ENST00000587945 GAS2O43903 313 aaKnown RBP15.98■□□□□ 0.15
VMP1-206ENST00000587945 SRGAP2BP0DMP2 458 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms