RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ST18O60284 1047 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 OFD1O75665 1012 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 GALTP07902 379 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 RAB27AP51159 221 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 PSMC5P62195 406 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 NOMO2Q5JPE7 1267 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 GALNT17Q6IS24 598 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 TMEM173Q86WV6 379 aaPredicted RBP15.78■□□□□ 0.12
DNMT1-213ENST00000587604 BLIDQ8IZY5 108 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
DNMT1-213ENST00000587604 ETNPPLQ8TBG4 499 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 LPPQ93052 612 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 JPH2Q9BR39 696 aaPredicted RBP15.78■□□□□ 0.12
DNMT1-213ENST00000587604 TBC1D13Q9NVG8 400 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 PIN4Q9Y237 131 aaKnown RBP15.78■□□□□ 0.12
DNMT1-213ENST00000587604 MYO15AQ9UKN7 3530 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 REC8O95072 547 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 DEXIO95424 95 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 BRD1O95696 1058 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 PDGFBP01127 241 aaPredicted RBP15.77■□□□□ 0.12
DNMT1-213ENST00000587604 WEE2P0C1S8 567 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 RNASELQ05823 741 aaKnown RBP15.77■□□□□ 0.12
DNMT1-213ENST00000587604 LONRF3Q496Y0 759 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 RARS2Q5T160 578 aaKnown RBP15.77■□□□□ 0.12
DNMT1-213ENST00000587604 KIAA1841Q6NSI8 718 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 ANO5Q75V66 913 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 RUFY3Q7L099 469 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 CATSPER4Q7RTX7 472 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 KSR1Q8IVT5 923 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 ZDHHC14Q8IZN3 488 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 C12orf76Q8N812 135 aaPredicted RBP15.77■□□□□ 0.12
DNMT1-213ENST00000587604 DAGLBQ8NCG7 672 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 SLC22A17Q8WUG5 538 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 AUTS2Q8WXX7 1259 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 ATOH1Q92858 354 aaPredicted RBP15.77■□□□□ 0.12
DNMT1-213ENST00000587604 PGBD4Q96DM1 585 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 USTQ9Y2C2 406 aa15.77■□□□□ 0.12
DNMT1-213ENST00000587604 FAM186AA6NE01 2351 aa15.77■□□□□ 0.11
DNMT1-213ENST00000587604 CFAP54Q96N23 3096 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 MEIS3P2A8K0S8 358 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 EPCAMP16422 314 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 TOB2Q14106 344 aaPredicted RBP15.76■□□□□ 0.11
DNMT1-213ENST00000587604 PPFIBP1Q86W92 1011 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 PLCD3Q8N3E9 789 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 ZNF274Q96GC6 653 aaPredicted RBP15.76■□□□□ 0.11
DNMT1-213ENST00000587604 NLRP4Q96MN2 994 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 IFT122Q9HBG6 1241 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 ZSWIM6Q9HCJ5 1215 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 CYP26B1Q9NR63 512 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 FAM86C1Q9NVL1 165 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 STK39Q9UEW8 545 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 LIMD1Q9UGP4 676 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 DDX25Q9UHL0 483 aaKnown RBP15.76■□□□□ 0.11
DNMT1-213ENST00000587604 DBR1Q9UK59 544 aaKnown RBP15.76■□□□□ 0.11
DNMT1-213ENST00000587604 INPP5FQ9Y2H2 1132 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 PCDHB2Q9Y5E7 798 aa15.76■□□□□ 0.11
DNMT1-213ENST00000587604 SPTBN4Q9H254 2564 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 CPLX1O14810 134 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 GALR2O43603 387 aaPredicted RBP15.75■□□□□ 0.11
DNMT1-213ENST00000587604 DKC1O60832 514 aaKnown RBP eCLIP15.75■□□□□ 0.11
DNMT1-213ENST00000587604 QARSP47897 775 aaKnown RBP15.75■□□□□ 0.11
DNMT1-213ENST00000587604 NONOQ15233 471 aaKnown RBP eCLIP15.75■□□□□ 0.11
DNMT1-213ENST00000587604 NPY5RQ15761 445 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 KANK3Q6NY19 840 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 CABP7Q86V35 215 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 EXOC8Q8IYI6 725 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 TDRD5Q8NAT2 981 aaKnown RBP15.75■□□□□ 0.11
DNMT1-213ENST00000587604 BCL7CQ8WUZ0 217 aaPredicted RBP15.75■□□□□ 0.11
DNMT1-213ENST00000587604 SLC7A3Q8WY07 619 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 FAM20AQ96MK3 541 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 AGPAT5Q9NUQ2 364 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 DNAJB4Q9UDY4 337 aa15.75■□□□□ 0.11
DNMT1-213ENST00000587604 H0Y858 1186 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 EML1O00423 815 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 GFRA3O60609 400 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 ALDH2P05091 517 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 ASGR2P07307 311 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 SLC11A1P49279 550 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 NPEPPSP55786 919 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 PPP2R5CQ13362 524 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 PTPN14Q15678 1187 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 INF2Q27J81 1249 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 PLA2G4FQ68DD2 849 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 CPLX2Q6PUV4 134 aaKnown RBP15.74■□□□□ 0.11
DNMT1-213ENST00000587604 AGMOQ6ZNB7 445 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 KRT25Q7Z3Z0 450 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 SRGAP1Q7Z6B7 1085 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 MRPL10Q7Z7H8 261 aaKnown RBP15.74■□□□□ 0.11
DNMT1-213ENST00000587604 ZNF280BQ86YH2 543 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 URGCPQ8TCY9 931 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 VN1R3Q9BXE9 311 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 GBP3Q9H0R5 595 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 KANSL3Q9P2N6 904 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 PPME1Q9Y570 386 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 COL4A3BPQ9Y5P4 624 aa15.74■□□□□ 0.11
DNMT1-213ENST00000587604 EPB41L2O43491 1005 aaKnown RBP15.73■□□□□ 0.11
DNMT1-213ENST00000587604 SLC37A4O43826 429 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 B4GALT3O60512 393 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 DDHD2O94830 711 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 P4HBP07237 508 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms