RNA–Protein interactions for RNA: ENST00000587481.1

NUTF2-208, Transcript of nuclear transport factor 2, human

Gene NUTF2, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUTF2-208	ENST00000587481	KCNH7	Q9NS40	1196 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	CLIC4	Q9Y696	253 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	AKAP10	O43572	662 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	NEMF	O60524	1076 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	ATP9A	O75110	1047 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	PPM1F	P49593	454 aa	Predicted RBP	10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	CPT1A	P50416	773 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	SP2	Q02086	613 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	DSC3	Q14574	896 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	GNPTAB	Q3T906	1256 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	CCDC62	Q6P9F0	684 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	NIPA1	Q7RTP0	329 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	OTOP2	Q7RTS6	562 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	NLRX1	Q86UT6	975 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	ETNPPL	Q8TBG4	499 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	MRGBP	Q9NV56	204 aa		10.86	□□□□□ -0.67
NUTF2-208	ENST00000587481	MROH7	Q68CQ1	1323 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	TLR3	O15455	904 aa	Known RBP	10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	MSH4	O15457	936 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	FIBP	O43427	364 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	CD4	P01730	458 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	ZNF286B	P0CG31	522 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	UBA1	P22314	1058 aa	Known RBP	10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	MPST	P25325	297 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	SERPINB3	P29508	390 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	ICAM3	P32942	547 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	ST13	P50502	369 aa	Known RBP	10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	SP4	Q02446	784 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	CEBPZ	Q03701	1054 aa	Known RBP	10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	MFSD5	Q6N075	450 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	ZNF365	Q70YC5	407 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	AGO4	Q9HCK5	861 aa	Known RBP	10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481		Q9Y3F1	56 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	TELO2	Q9Y4R8	837 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	SPATA31C2	B4DYI2	1134 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	KCNA2	P16389	499 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	ARHGAP1	Q07960	439 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	ITGB3BP	Q13352	177 aa	Predicted RBP	10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	SETDB1	Q15047	1291 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	DEFB128	Q7Z7B8	93 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	C4orf32	Q8N8J7	132 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	HAS1	Q92839	578 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	KCNMB3	Q9NPA1	279 aa		10.85	□□□□□ -0.67
NUTF2-208	ENST00000587481	KIAA1217	Q5T5P2	1943 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	ESPN	B1AK53	854 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	PTPA	Q15257	358 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	CELF2-AS1	Q8N7Q2	184 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	MTG1	Q9BT17	334 aa	Predicted RBP	10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	MTMR10	Q9NXD2	777 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	MYO9B	Q13459	2157 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	SFI1	A8K8P3	1242 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	ZBBX	A8MT70	800 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	CABYR	O75952	493 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	GH1	P01241	217 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	PGR	P06401	933 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	MMP3	P08254	477 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	VARS	P26640	1264 aa	Known RBP	10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	PBX2	P40425	430 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	NKX3-2	P78367	333 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	ORC2	Q13416	577 aa	Predicted RBP	10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	CALCRL	Q16602	461 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	HSDL1	Q3SXM5	330 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	MEI1	Q5TIA1	1274 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	MTMR9	Q96QG7	549 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	ZNF577	Q9BSK1	485 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	RBCK1	Q9BYM8	510 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	WNT8A	Q9H1J5	351 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	NGRN	Q9NPE2	291 aa	Known RBP	10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	IPP	Q9Y573	584 aa		10.84	□□□□□ -0.67
NUTF2-208	ENST00000587481	XIRP2	A4UGR9	3374 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	IPO5	O00410	1097 aa	Known RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	RHOBTB3	O94955	611 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	OR52Z1	P0C646	297 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	TNFAIP3	P21580	790 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	NASP	P49321	788 aa	Predicted RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	ATP2C1	P98194	919 aa	Predicted RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	DNAJC21	Q5F1R6	531 aa	Known RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	TMEM240	Q5SV17	173 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	CCDC70	Q6NSX1	233 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	TMEM199	Q8N511	208 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	TPCN2	Q8NHX9	752 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	SLC5A5	Q92911	643 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	CDHR1	Q96JP9	859 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	ZNF396	Q96N95	335 aa	Predicted RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	DDX39A	O00148	427 aa	Known RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	SMAP	O00193	183 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	DHX15	O43143	795 aa	Known RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	MAP3K13	O43283	966 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	GGPS1	O95749	300 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	EPHB1	P54762	984 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	ZNF200	P98182	395 aa	Predicted RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	KAT2B	Q92831	832 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	ZNF830	Q96NB3	372 aa	Predicted RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	NOC4L	Q9BVI4	516 aa	Known RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	LMBRD1	Q9NUN5	540 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	CHD7	Q9P2D1	2997 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	NOD1	Q9Y239	953 aa		10.83	□□□□□ -0.68
NUTF2-208	ENST00000587481	ATP6V1D	Q9Y5K8	247 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms