RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 MBTD1Q05BQ5 628 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 POU5F1BQ06416 359 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 NCBP1Q09161 790 aaKnown RBP16.42■□□□□ 0.22
ATG4D-207ENST00000587256 PCBP1Q15365 356 aaKnown RBP eCLIP16.42■□□□□ 0.22
ATG4D-207ENST00000587256 FAM173BQ6P4H8 233 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 CABP7Q86V35 215 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-207ENST00000587256 ZBTB8OSQ8IWT0 167 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 LRRC43Q8N309 656 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 HELQQ8TDG4 1101 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 PLVAPQ9BX97 442 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 NT5C3AQ9H0P0 336 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 ZSCAN16Q9H4T2 348 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-207ENST00000587256 FAM105AQ9NUU6 356 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 LMCD1Q9NZU5 365 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 CSPG5O95196 566 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 EOMESO95936 686 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 ATF7P17544 494 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-207ENST00000587256 UBA7P41226 1012 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 CEBPZQ03701 1054 aaKnown RBP16.41■□□□□ 0.22
ATG4D-207ENST00000587256 PPP2R5AQ15172 486 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 LONRF3Q496Y0 759 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 NOTUMQ6P988 496 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 ZNF598Q86UK7 904 aaKnown RBP16.41■□□□□ 0.22
ATG4D-207ENST00000587256 SPRYD3Q8NCJ5 442 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 DEPTORQ8TB45 409 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 KIFAP3Q92845 792 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 IFT74Q96LB3 600 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 PLIN2Q99541 437 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 TRAIPQ9BWF2 469 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 NFKBIZQ9BYH8 718 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 C2orf40Q9H1Z8 148 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 AAASQ9NRG9 546 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 RNF19AQ9NV58 838 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 CLIC4Q9Y696 253 aa16.41■□□□□ 0.22
ATG4D-207ENST00000587256 FNDC1Q4ZHG4 1894 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-207ENST00000587256 EYSQ5T1H1 3165 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 AXLP30530 894 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 LONP1P36776 959 aaKnown RBP16.4■□□□□ 0.22
ATG4D-207ENST00000587256 TMEM132AQ24JP5 1023 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 TIGD5Q53EQ6 642 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 CLLU1OSQ5K130 101 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 HYIQ5T013 277 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 CDCA2Q69YH5 1023 aaPredicted RBP16.4■□□□□ 0.22
ATG4D-207ENST00000587256 KCNK18Q7Z418 384 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 BSNDQ8WZ55 320 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 LPPQ93052 612 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 MRPL38Q96DV4 380 aaKnown RBP16.4■□□□□ 0.22
ATG4D-207ENST00000587256 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 CALML4Q96GE6 196 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 CPB2Q96IY4 423 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 CASD1Q96PB1 797 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 PNMA5Q96PV4 448 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 MRPL9Q9BYD2 267 aaKnown RBP16.4■□□□□ 0.22
ATG4D-207ENST00000587256 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
ATG4D-207ENST00000587256 THEGQ9P2T0 379 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 HCSTQ9UBK5 93 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 PCDHB2Q9Y5E7 798 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 PCDHB12Q9Y5F1 795 aa16.4■□□□□ 0.22
ATG4D-207ENST00000587256 LAG3P18627 525 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 LIG1P18858 919 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 MARCKSP29966 332 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-207ENST00000587256 HOXA11P31270 313 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-207ENST00000587256 NAMPTP43490 491 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 TMEM119Q4V9L6 283 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-207ENST00000587256 GLB1LQ6UWU2 654 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 KCTD17Q8N5Z5 321 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-207ENST00000587256 P2RX5Q93086 422 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 PGBD4Q96DM1 585 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 DRC1Q96MC2 740 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 RUSC1Q9BVN2 902 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 TRIM6Q9C030 488 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-207ENST00000587256 POLD4Q9HCU8 107 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 PRDM6Q9NQX0 595 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 PRMT7Q9NVM4 692 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-207ENST00000587256 INPP5FQ9Y2H2 1132 aa16.39■□□□□ 0.21
ATG4D-207ENST00000587256 GRM6O15303 877 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 B4GALT5O43286 388 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 SLC26A4O43511 780 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 HIP1RO75146 1068 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 ARF4P18085 180 aaPredicted RBP16.38■□□□□ 0.21
ATG4D-207ENST00000587256 GRIN1Q05586 938 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 PTPAQ15257 358 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 AMHR2Q16671 573 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 CSPP1Q1MSJ5 1256 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 UBXN11Q5T124 520 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 THNSL1Q8IYQ7 743 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 KLHL23Q8NBE8 558 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 COLGALT1Q8NBJ5 622 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 RSPH1Q8WYR4 309 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 PRIMPOLQ96LW4 560 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 USP28Q96RU2 1077 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 ALG13Q9NP73 1137 aaKnown RBP16.38■□□□□ 0.21
ATG4D-207ENST00000587256 CNTNAP2Q9UHC6 1331 aa16.38■□□□□ 0.21
ATG4D-207ENST00000587256 MEIS3P2A8K0S8 358 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms